Table 3.
Estimates of evolutionary divergence between bovine archetypal WC1.1, bovine CD163A and bovine CD163c-α SRCR domains
| BtWC1.1 | ||||||||
|---|---|---|---|---|---|---|---|---|
| SRCR domain | a | b | c | d | e | d' | ||
| 1 | 2, 7 | 3, 8 | 4, 6, 9 | 5, 10 | 11 | |||
| BtCD163A | h | 1 | 0.551 (0.056) | 0.667, 0.654 (0.053, 0.054) | 0.641, 0.654 (0.054, 0.054) | 0.462, 0.462, 0.500 (0.056, 0.056, 0.057) | 0.705, 0.692 (0.052, 0.052) | 0.500 (0.057) |
| i | 2 | 0.526 (0.057) | 0.577, 0.564 (0.056, 0.056) | 0.590, 0.615 (0.056, 0.055) | 0.436, 0.410, 0.436 (0.056, 0.056, 0.056) | 0.705, 0.667 (0.052, 0.053) | 0.487 (0.057) | |
| j | 3 | 0.500 (0.057) | 0.679, 0.654 (0.053, 0.054) | 0.654, 0.679 (0.054, 0.053) | 0.449, 0.449, 0.449 (0.056, 0.056, 0.056) | 0.705, 0.705 (0.052, 0.052) | 0.500 (0.057) | |
| k | 4 | 0.564 (0.056) | 0.654, 0.641 (0.054, 0.054) | 0.615, 0.615 (0.055, 0.055) | 0.564, 0.551, 0.577 (0.056, 0.056, 0.056) | 0.705, 0.692 (0.052, 0.052) | 0.500 (0.057) | |
| b | 5 | 0.551 (0.056) | 0.449, 0.436 (0.056, 0.056) | 0.577, 0.603 (0.056, 0.055) | 0.526, 0.590, 0.513 (0.057, 0.056, 0.054) | 0.718, 0.692 (0.051, 0.052) | 0.538 (0.056) | |
| c | 6 | 0.590 (0.056) | 0.615, 0.590 (0.055, 0.056) | 0.513, 0.538 (0.057, 0.056) | 0.513, 0.590, 0.526 (0.057, 0.056, 0.057) | 0.769, 0.731 (0.048, 0.050) | 0.603 (0.055) | |
| d | 7 | 0.487 (0.057) | 0.641, 0.628 (0.054, 0.055) | 0.590, 0.603 (0.056, 0.055) | 0.218, 0.321, 0.218 (0.047, 0.053, 0.047) | 0.667, 0.641 (0.053, 0.054) | 0.474 (0.057) | |
| e | 8 | 0.744 (0.049) | 0.731, 0.705 (0.050, 0.052) | 0.731, 0.731 (0.050, 0.050) | 0.718, 0.744, 0.692 (0.051, 0.049, 0.052) | 0.513, 0.500 (0.057, 0.057) | 0.692 (0.052) | |
| d' | 9 | 0.526 (0.057) | 0.615, 0.590 (0.055, 0.056) | 0.590, 0.590 (0.056, 0.056) | 0.423, 0.436, 0.397 (0.056, 0.056, 0.055) | 0.679, 0.667 (0.053, 0.053) | 0.359 (0.054) | |
| BtCD163c-α | m | 1 | 0.654 (0.054) | 0.756, 0.731 (0.049. 0.050) | 0.679, 0.679 (0.053, 0.053) | 0.654, 0.667, 0.654 (0.054, 0.053, 0.054) | 0.795, 0.769 (0.046, 0.048) | 0.628 (0.055) |
| l | 2 | 0.718 (0.051) | 0.692, 0.705 (0.052, 0.052) | 0.705, 0.718 (0.052, 0.051) | 0.654, 0.654, 0.667 (0.054, 0.054, 0.053) | 0.769, 0.795 (0.048, 0.046) | 0.679 (0.053) | |
| b | 3 | 0.551 (0.056) | 0.538, 0.526 (0.056, 0.057) | 0.577, 0.577 (0.056, 0.056) | 0.513, 0.577, 0.526 (0.057, 0.056, 0.057) | 0.718, 0.692 (0.051, 0.052) | 0.526 (0.057) | |
| c | 4 | 0.603 (0.055) | 0.628, 0.615 (0.055, 0.055) | 0.526, 0.538 (0.057, 0.056) | 0.603, 0.615, 0.603 (0.055, 0.055, 0.055) | 0.744, 0.744 (0.049, 0.049) | 0.615 (0.055) | |
| n | 5 | 0.513 (0.057) | 0.679, 0.667 (0.053, 0.053) | 0.654, 0.654 (0.054, 0.054) | 0.564, 0.590, 0.564 (0.056, 0.056, 0.056) | 0.744, 0.756 (0.049, 0.049) | 0.564 (0.056) | |
| d | 6 | 0.500 (0.057) | 0.577, 0.564 (0.056, 0.056) | 0.577, 0.590 (0.056, 0.056) | 0.346, 0.423, 0.333 (0.054, 0.056, 0.053) | 0.679, 0.667 (0.053, 0.053) | 0.487 (0.057) | |
| e | 7 | 0.705 (0.052) | 0.667, 0.679 (0.056, 0.056) | 0.692, 0.718 (0.052, 0.051) | 0.628, 0.641, 0.628 (0.055, 0.054, 0.055) | 0.526, 0.526 (0.057, 0.057) | 0.615 (0.055) | |
| d' | 8 | 0.526 (0.057) | 0.577, 0.577 (0.053, 0.053) | 0.615, 0.615 (0.055, 0.055) | 0.436, 0.423, 0.397 (0.056, 0.056, 0.055) | 0.615, 0.615 (0.055, 0.055) | 0.321 (0.053) | |
Analyses were conducted as described in Table 1.