Table 6.
Results of experiment 2: prioritization of prostate cancer genes by genomic data fusion
| Name | Ensemble id | References | L∞ | L∞(0.5) | L1 | L2 | Endeavour |
|---|---|---|---|---|---|---|---|
| CPNE | ENSG00000085719 | Thomas et al. | 0.3030 | 0.2323 | 0.1010 | 0.1212 | - |
| 31/100 | 24/100 | 11/100 | 13/100 | 70/100 | |||
| CDH23 | ENSG00000107736 | Thomas et al. | 0.0606 | 0.0303 | 0.0202 | 0.0101 | - |
| 7/100 | 4/100 | 3/100 | 2/100 | 78/100 | |||
| EHBP1 | ENSG00000115504 | Gudmundsson et al. | 0.5354 | 0.5152 | 0.3434 | 0.3939 | - |
| 54/100 | 52/100 | 35/100 | 40/100 | 57/100 | |||
| MSMB | ENSG00000138294 | Eeles et al. | 0.0202 | 0.0202 | 0.0505 | 0.0303 | - |
| Thomas et al. | 3/100 | 3/100 | 6/100 | 4/100 | 69/100 | ||
| KLK3 | ENSG00000142515 | Eeles et al. | 0.3434 | 0.3535 | 0.2929 | 0.2929 | - |
| 35/100 | 36/100 | 30/100 | 30/100 | 28/100 | |||
| JAZF1 | ENSG00000153814 | Thomas et al. | 0.0505 | 0.0202 | 0.0202 | 0.0202 | - |
| 6/100 | 3/100 | 3/100 | 3/100 | 7/100 | |||
| LMTK2 | ENSG00000164715 | Eeles et al. | 0.3131 | 0.4646 | 0.8081 | 0.7677 | - |
| 32/100 | 47/100 | 81/100 | 77/100 | 31/100 | |||
| IL16 | ENSG00000172349 | Thomas et al. | 0 | 0.0101 | 0.0303 | 0.0101 | - |
| 1/100 | 2/100 | 4/100 | 2/100 | 72/100 | |||
| CTBP2 | ENSG00000175029 | Thomas et al. | 0.8283 | 0.5758 | 0.6364 | 0.6869 | - |
| 83/100 | 58/100 | 64/100 | 69/100 | 38/100 | |||
Results of experiment 2: prioritization of prostate cancer genes by genomic data fusion. For each novel prostate cancer gene, the first row shows the error of AUC values and the second row lists the ranking position of the prostate cancer gene among its 99 closet neighboring genes.