Table 1.
P value |
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Human module | Mouse module | Overlap number* | Overlap P value | Top CTX module | Top CTX module characterization | Human | Mouse | PreservationZ-score |
M1h | — | — | — | M17 | PvalB+ interneurons | 8.1E-148 | — | 2.86 |
M2h | — | — | — | M9 | Oligodendrocytes | <1E-300 | — | 5.79 |
M3h | — | — | — | M15 | Astrocytes | 8.1E-300 | — | 0.86 |
M4h | M4m | 163 (34) | 2.6E-80 | M7 | Mitochondria | 1.5E-243 | 1.9E-41 | 17.21 |
M5h | M5m | 137 (43) | 5.5E-41 | M7 | Mitochondria | 1.2E-255 | 2.5E-57 | 6.72 |
M6h | M6m | 58 (16) | 4.8E-18 | M10 | Glutamatergic synapse | 2.9E-102 | 3.7E-62 | 4.19 |
M7h | — | — | — | M11 | Unknown | 4.0E-91 | — | 0.32 |
M8h | M8m | 26 (7) | 2.8E-08 | M5 | Microglia | 1.1E-169 | 1.6E-06‡ | 2.80 |
M9h | — | — | — | M19 | Unknown | 1.6E-19 | — | 0.42 |
M10h | M10m | 6 (1) | 9.9E-04 | M4 | Microglia | 8.6E-120 | N/S | 4.15 |
M11h | — | — | — | M16 | Neuron | 3.5E-278 | — | 11.73 |
M12h | M12m | 38 (7) | 5.7E-18 | M2 | Ribosome | 5.1E-68 | 4.7E-09 | 12.84 |
M13h | M13m | 92 (29) | 1.6E-25 | M16 | Neuron | 1.1E-160 | 2.2E-33 | 2.10 |
M14h | M14m | 200 (61) | 2.1E-65 | M18 | Nucleus† | 1.0E-233 | 1.0E-107 | 8.90 |
M15h | M15m | 15 (6) | 4.2E-02 | M19 | Unknown | 6.1E-151 | 1.9E-11‡ | 1.23 |
Columns 5–7 represent the module from the CTX network in ref. 3 showing the highest overlap with each module in the human network, along with associated characterization. Significance of overlap with the corresponding mouse module is presented in column 8. Column 9 measures module preservation (bolded Z-scores indicate significant preservation). P values are corrected for multiple comparisons.
*The expected number of overlapping genes is presented in parentheses.
†Module characterization was inferred using other means.
‡Overlap with a network other than CTX in ref. 3 (M8m = CN network, M15m = CTX95 network).