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. Author manuscript; available in PMC: 2011 Apr 2.
Published in final edited form as: J Mol Biol. 2010 Feb 2;397(3):677–688. doi: 10.1016/j.jmb.2010.01.068

Figure 9.

Figure 9

(a) Opening free energy changes (ΔGop) for rU-dA/dT-dA base pairs in the RNA-DNA and DNA-DNA duplexes investigated. The experimental errors for the values in the RNA-DNA hybrid are smaller than the symbols.

(b) The free energy contributions (ΔΔGop) of individual rU-dA/dT-dA base pairs to the destabilization of the elongation complex at the transcription termination site, calculated based on the thermodynamic model (Eq. 3).