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. 2010 May 6;56(4):321–340. doi: 10.1007/s00294-010-0302-6

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© The Author(s) 2010

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Fig. 3 — The correlations are shown between pairs of inherent IR features in the S. cerevisiae genome (blue) and in a representative RA (randomized) genome (red). No correlation is found between spacer length and either copy length (a) or percent match (b) in either case. The strong negative correlation between percent match and copy length seen in (c) results from the scoring scheme of the IRFinder algorithm, which allows more imperfections in longer IRs. A very weak correlation exists between percent AT and copy length (d)