Table 2.
Nonsynonymous coding mutations in five FDC/IDC genes
| Gene/ Proband |
Exon* | UCSC Coordinates |
Nucleotide Change† |
Amino Acid Change‡ |
Conservation§ | Disease associated? |
Diagnosis FDC‖ or IDC¶ |
Segregation# | Previously reported |
Reference |
|---|---|---|---|---|---|---|---|---|---|---|
| A. MYBPC3, myosin binding protein C | ||||||||||
| A.1 | 1 | chr11:47330762 | G-2068-C | Gly5Arg | C, M, R, D | Possibly | FDC | HCM | 16 | |
| A.2 | 5 | chr11:47327951 | A-4879-C | Lys202Gln | All | Possibly | IDC | |||
| A.3 | 7 | chr11:47325991 | C-6839-T | Arg272Cys | C, M, R, D | Possibly | FDC | DCM | 17 | |
| A.4 | 17 | chr11:47320861 | G-11969-A | Gly490Arg | All | Possibly | FDC | HCM | 16, 18 | |
| A.5 | 18 | chr11:47320244 | T-12586-C | Met555Thr | C | Possibly | FDC | |||
| A.6 | 19 | chr11:47319348 | A-13482-G | Asp605Gly | All | Possibly | FDC | |||
| A.7 | 25 | chr11:47315623 | G-17207-A | Ala833Thr | All | Likely | FDC | HCM | 19 | |
| A.8 | 25 | chr11:47315623 | G-17207-A | Ala833Thr | All | Likely | FDC | Yes (2) | HCM | 19 |
| A.9 | 25 | chr11:47315623 | G-17207-A | Ala833Thr | All | Likely | IDC | HCM | 19 | |
| A.10** | 26 | chr11:47314013 | C-18817-A | Pro910Thr | C | Possibly | IDC | |||
| A.11 | 29 | chr11:47311683 | G-21147-A | splice site (29+1) |
All | Possibly | IDC | |||
| A.12†† | 31 | chr11: 47310940 | G-21890-T | splice site (31+1) |
All | Possibly | FDC | |||
| A.13†† | 33 | chr11:47310234 | G-22596-A | Gly1260Asp | All | Possibly | FDC | |||
| A.14 | 33 | chr11:47310222 | G-22608-T | Cys1264Phe | C, M, R, D | Likely | FDC | Yes (2) | ||
| B. MYH6, α-myosin heavy chain | ||||||||||
| B.1‡‡ | 9 | chr14:22942471 | T-6852-A | Ile275Asn | C. M, R | Possibly | FDC | DCM | 20 | |
| B.2§§ | 14 | chr14:22937966 | C-11357-T | Arg568Cys | Yes | Possibly | IDC | |||
| B.3 | 22 | chr14:22932486 | G-16837-T | Ala1004Ser | All except T | Likely | FDC | DCM | 20 | |
| B.4 | 22 | chr14:22932486 | G-16837-T | Ala1004Ser | All except T | Likely | IDC | DCM | 20 | |
| B.5 | 22 | chr14:22932486 | G-16837-T | Ala1004Ser | All except T | Likely | IDC | DCM | 20 | |
| B.6 | 25 | chr14:22929309 | C-20014-T | Arg1177Trp | All | Possibly | FDC | |||
| B.7‖‖ | 29 | chr14:22927245 | G-22078-C | Ala1440Pro | All except T | Likely | FDC | Yes (2) | ||
| B.8‡‡ | 30 | chr14:22926827 | G-22496-A | Arg1502Gln | All | Possibly | FDC | 20 | ||
| B.9 | 35 | chr14:22923580 | G-25743-A | Asp1826Asn | C | Likely | FDC | Yes (2) | ||
| chr14:22923579 | G-25744-A | C | ||||||||
| B.10¶¶ | 35 | chr14:22923580 | G-25743-A | Asp1826Asn | C | Likely | IDC | |||
| chr14:22923579 | G-25744-A | C | ||||||||
| B.11 | 36 | chr14:22921578 | C-27745-T | Arg1899Cys | Yes | Unlikely | FDC | No | ||
| C. TPM1, tropomyosin 1 | ||||||||||
| C.1 | 1 | chr15:61122126 | G-3244-T | Lys15Asn | All | Likely | FDC | Yes (3) | ||
| C.2 | 1 | chr15:61122148 | G-3266-C | Glu23Gln | All | Possibly | IDC | |||
| C.3 | 1 | chr15:61127874 | G-8992-T | Ser16Ile | C, M, R, D | Possibly | FDC | |||
| C.4 | 2 | chr15: 61136271 | T-17389-C | Ile92Thr | All | Likely | FDC | Yes (2) | ||
| C.5 | 8 | chr15:61141840 | G-22958-A | Ala239Thr | All | Possibly | FDC | |||
| C.6‖## | 9 | chr15:61143373 | C-24491-T | Ala277Val | All | Possibly | IDC | |||
| D. TNNC1, troponin C | ||||||||||
| D.1*** | 1 | chr3:52463059 | T-2040-C | Tyr5His | All | Possibly | IDC | |||
| D.2 | 4 | chr3:52460808 | G-4291-A | Met103Ile | All | Likely | FDC | Yes (2) | ||
| D.3** | 5 | chr3:52460466 | C-4633-A | Asp145Glu | All | Possibly | IDC | HCM | 21 | |
| D.4 | 5 | chr3:52460459 | A-4640-G | Ile148Val | All | Possibly | FDC | |||
| E. TNNI3, cardiac troponin I | ||||||||||
| E.1 | 7 | chr19:60357220 | TNNI3-A-5697-G | Asp180Gly | All | Possibly | FDC | |||
| E.2 | 7 | chr19:60357220 | TNNI3-A-5697-G | Asp180Gly | All | Possibly | IDC | |||
Exon number is per refseq.
Nucleotide numbering is per the SeattleSNPs resequencing service
Amino acid numbering is per previous publications
Human sequence was assessed in chimp (C), mouse (M), rat (R), dog (D), tetraodon (T), fugu, and zebrafish
Probable FDC was considered FDC
possible FDC was considered IDC (see Methods)
Segregation means multiple affected carrying mutation, the number affected are given within parentheses; entry left blank because of insufficient clinical data and/or DNA specimens to assess segregation
A.10 and D.3 are found in the same proband
A.12 and A.13 are found in the same proband
B.1 and B.8 are found in same proband. This proband also carries a TNNT2 Lys210del mutation
Caucasian of Hispanic descent
African-American
This proband also carries a LMNA G474_D475insQ mutation and a TCAP Pro141Ala mutation
Proband carries TNNT2 Glu244Asp mutation
Proband carries possibly disease causing MYH7 Arg1045Cys mutation.