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. 2010 May 6;38(13):e139. doi: 10.1093/nar/gkq282

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© The Author(s) 2010. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 6. — Frequencies of selected sequences as a function of tree edit distance for (a) DSL and (b) T80 in Figure 3a in 10⁹ sequence designed and random pools. Designed pools are generated from C-DSL and nucleotide transition probability matrix 14 for DSL and C-T80 and nucleotide transition probability matrix 9 for T80. (c) T80 candidate with T = 4 from a designed pool. No T80-like motif was found from a 10⁹ sequence random pool.