Table 1.
fDs Sequence Tag Placement and Repeat Analysis
| fDs Tag Length (bp) |
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| BLASTN (Locations)a | Placed?b | Insertions | Fraction | n, Tagsc | Average | Min | Max | Repeat Content | Repetitive Sequences |
| One or two | Yes | 1616 | 79.7% | 1980 | 418 | 15 | 1676 | 7.6% | 1.7% |
| Multiple | No | 139 | 6.9% | 169 | 533 | 21 | 1313 | 19.1% | 7.7% |
| None; e-value < 10−10 | No | 114 | 5.6% | 115 | 117 | 19 | 568 | 3.9% | 0.9% |
| None; e-value > 10−10 | No | 159 | 7.8% | 175 | 244 | 23 | 860 | 11.9% | 5.1% |
| Totals | 2028 | 100.0% | 2439 | 399 | 15 | 1676 | 8.8% | 2.3% | |
a
Sequence tags grouped into categories based on number of locations they are placed to by our BLAST pipeline.
b
Genome placement status in public displays at http://plantgdb.org/prj/AcDsTagging/records.php.
c
Number of sequence tags in this category.