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. 2010 Jul;78(1):58–68. doi: 10.1124/mol.110.064311

TABLE 1.

List of primers used in this study

The location (starting at the 5′ end) of each primer is designated relative to +1 (as the ATG start codon).

Name Primer (5′ → 3′) Location Notes
mMOR-S1 CCCTCTATTCTATCGTGTGTGT +218 Located at exon 1
mMOR-AS1 AGAAGAGAGGATCCAGTTGCA +568 Located at exon 2
MOR_E3-S CATCAAAGCACTGATCACGATTCC +903 Located at exon 3
MOR_E4-AS TAGGGCAATGGAGCAGTTTCTGC +1196 Located at exon 4
AS-210 CCACCTTAGAAGTACACGGAGGC −210 LM-PCR
AS-233 GCATCCTTAGCATCCCCAAAGCGCCACTCT −233 LM-PCR
AS-260 TCTCTGAGTGGAAGGGAGGGAGCAT −260 LM-PCR, L2a
AS-288 CTGTGAGGGATCCAGAGGCTAGAGGGGAGG −288 LM-PCR
Linker 1 GCGGTGACCCGGGAGATCTGAATTC
Linker 2 GAATTCAGATC
S-731 CTTTGAACAGGTTTGTGGGGTTG −731 N3a
AS-623 TTACCCACATCCCCATATCTGA −623 N3a
S-606 CCCTCCAGTCCTAATTAATTGC −606 L3a
AS-473 TCTTTGTAACAACCATGCATTAGGT −473 L3a
S-497 ACCTAATGCATGGTTGTTACAAAG −497 N2a
AS-393 AAGGAGTGTAAATTGGGGTAGG −393 N2a
S-381 GCATAGAGACTGAGGAGGCTGATTCTG −381 L2a
S-342 CACAATCCACTCCTTCTCTCTCCTC −342 N1a
AS-229 AGGCGCATCCTTAGCATCCCCA −229 N1a
S-328 TCTCTCTCCTCCCTCCCCTCTAGCCTCTGG −328 L1a
AS-178 GTCCGATATTCTCCTCTGCTTGTAG −178 L1a
AS-182 GATATTCTCCTCTGCTTGTAGCCC −182
S-408 CCAATTTACACTCCTTTACACGGAAGT −408 Real-time qPCR primer for MOR
AS-285 GGGCTGTGAGGGATCCAGAGGCTAG −285 Real-time qPCR primer for MOR

S, sense; AS, antisense.

a

Names of products from nucleosome-specific PCR (see Fig. 3A).