TABLE 1.
List of primers used in this study
The location (starting at the 5′ end) of each primer is designated relative to +1 (as the ATG start codon).
| Name | Primer (5′ → 3′) | Location | Notes |
|---|---|---|---|
| mMOR-S1 | CCCTCTATTCTATCGTGTGTGT | +218 | Located at exon 1 |
| mMOR-AS1 | AGAAGAGAGGATCCAGTTGCA | +568 | Located at exon 2 |
| MOR_E3-S | CATCAAAGCACTGATCACGATTCC | +903 | Located at exon 3 |
| MOR_E4-AS | TAGGGCAATGGAGCAGTTTCTGC | +1196 | Located at exon 4 |
| AS-210 | CCACCTTAGAAGTACACGGAGGC | −210 | LM-PCR |
| AS-233 | GCATCCTTAGCATCCCCAAAGCGCCACTCT | −233 | LM-PCR |
| AS-260 | TCTCTGAGTGGAAGGGAGGGAGCAT | −260 | LM-PCR, L2a |
| AS-288 | CTGTGAGGGATCCAGAGGCTAGAGGGGAGG | −288 | LM-PCR |
| Linker 1 | GCGGTGACCCGGGAGATCTGAATTC | ||
| Linker 2 | GAATTCAGATC | ||
| S-731 | CTTTGAACAGGTTTGTGGGGTTG | −731 | N3a |
| AS-623 | TTACCCACATCCCCATATCTGA | −623 | N3a |
| S-606 | CCCTCCAGTCCTAATTAATTGC | −606 | L3a |
| AS-473 | TCTTTGTAACAACCATGCATTAGGT | −473 | L3a |
| S-497 | ACCTAATGCATGGTTGTTACAAAG | −497 | N2a |
| AS-393 | AAGGAGTGTAAATTGGGGTAGG | −393 | N2a |
| S-381 | GCATAGAGACTGAGGAGGCTGATTCTG | −381 | L2a |
| S-342 | CACAATCCACTCCTTCTCTCTCCTC | −342 | N1a |
| AS-229 | AGGCGCATCCTTAGCATCCCCA | −229 | N1a |
| S-328 | TCTCTCTCCTCCCTCCCCTCTAGCCTCTGG | −328 | L1a |
| AS-178 | GTCCGATATTCTCCTCTGCTTGTAG | −178 | L1a |
| AS-182 | GATATTCTCCTCTGCTTGTAGCCC | −182 | |
| S-408 | CCAATTTACACTCCTTTACACGGAAGT | −408 | Real-time qPCR primer for MOR |
| AS-285 | GGGCTGTGAGGGATCCAGAGGCTAG | −285 | Real-time qPCR primer for MOR |
S, sense; AS, antisense.
Names of products from nucleosome-specific PCR (see Fig. 3A).