Table 1.
Geographically and temporally distributed Harveyi clade strains used in this study.
| Strain | Assigned species | Origin | Location/year | Source | Used in |
|---|---|---|---|---|---|
| CAIM 29 | harveyi | Diseased shrimp (Litopenaeus sp.) larvae isolate | Jepara, Indonesia/1990 | CAIM | CGH/MLSA |
| CAIM 148 | harveyi | Diseased shrimp (Penaeus sp.) haemolymph isolate | Valle de Matatipac, Mexico/1995 | CAIM | CGH/MLSA |
| CAIM 461 | harveyi | Shark tank water isolate | Denmark/1993 | CAIM | CGH/MLSA |
| CAIM 463 | harveyi | Sea bass (Dicentrarchus labrax) isolate | Greece/1991 | CAIM | CGH/MLSA |
| CAIM 464 | harveyi | Turbot (Scophthalmus maximus) isolate | Spain/1990 | CAIM | CGH/MLSA |
| CAIM 606a | harveyi | Japanese horse mackerel (Trachurus japonicus) isolate | Uchiura Bay, Numazu, Japan/1992 | CAIM | CGH/MLSA |
| CAIM 1075 | harveyi | Oyster (Crassostrea gigas) isolate | SCPA Burabampo SCL, Mexico/2003 | CAIM | CGH/MLSA |
| CAIM 1754 | harveyi | Puffer fish (Spheroides annulatus) heart isolate | CIAD AC, Mexico/2005 | CAIM | CGH/MLSA |
| CAIM 1766 | harveyi | Sea horse (Hipocampus ingens) liver isolate | Mazatlan Aquarium, Mexico/2005 | CAIM | CGH/MLSA |
| CAIM 1792 | harveyi | Diseased shrimp (Litopenaeus vannamei) lesion isolate | Aquastrat S.A. de C.V., Mexico/2005 | CAIM | CGH/MLSA |
| ATCC BAA-1116f | harveyi | Marine (ocean) isolate | Unknown/1993 | ATCC | CGH/MLSA |
| ATCC 33843 | harveyi | 392 [MAV] | Woods Hole, USA/1971 | ATCC | CGH/MLSA |
| ATCC 35804b | harveyi | Brown shark (Carcharhinus plumbeus) kidney isolate | Baltimore, USA/1982 | ATCC | CGH/MLSA |
| ATCC 14126c | harveyi | Dead, luminescing amphipod (Talorchestia sp.) isolate | Woods Hole, USA/1935 | ATCC | CGH/MLSA |
| D1 | harveyi | White grunt (Haemulon plumieri) gut isolate | Chub Cay, Bahamas/1992 | UWM | CGH/MLSA |
| E1 | harveyi | White grunt (H. plumieri) gut isolate | Chub Cay, Bahamas/1992 | UWM | CGH/MLSA |
| G1 | harveyi | White grunt (H. plumieri) gut isolate | Chub Cay, Bahamas/1992 | UWM | CGH/MLSA |
| H6 | harveyi | Squirrelfish (Holocentrus sp.) gut isolate | Chub Cay, Bahamas/1992 | UWM | CGH/MLSA |
| L1 | harveyi | White grunt (H. plumieri) gut isolate | Chub Cay, Bahamas/1992 | UWM | CGH/MLSA |
| 501J | harveyi | Surface water isolate | Boca Ciega Bay, Florida, USA/2001 | UWM | CGH/MLSA |
| 602L | harveyi | Surface water isolate | Boca Ciega Bay, Florida, USA/2002 | UWM | CGH/MLSA |
| 9567-98 | harveyi | Research isolate | Unknown/1998 | CDC | CGH/MLSA |
| 2415-05 | harveyi | Human blood isolate | Hawaii, USA/2005 | CDC | CGH/MLSA |
| 74F | harveyi | Diseased coral (Mussimilia braziliensis) isolate | Abrolhos bank, Brazil/2007 | UFRJ | CGH/MLSA |
| PA2 | harveyi | Diseased coral (M. braziliensis) isolate | Abrolhos bank, Brazil/2007 | UFRJ | CGH/MLSA |
| 1DA3 | harveyi | Diseased coral (Phyllogorgia dilatata) isolate | Abrolhos bank, Brazil/2007 | UFRJ | CGH/MLSA |
| 50A | harveyi | Healthy coral (Mussimilia hispida) isolate | Abrolhos bank, Brazil/2007 | UFRJ | CGH |
| 9078-83 | harveyi | Research isolate | Unknown/1983 | CDC | CGH/MLSA |
| HY01 | harveyi | Dead, luminescing shrimp isolate | Hat Yai, Thailand/2004 | PSU | CGH/MLSA |
| CAIM 115 | campbellii | Shrimp (Litopenaeus sp.) haemolymph isolate | Mexico/1999 | CAIM | CGH/MLSA |
| CAIM 198 | campbellii | Shrimp (Litopenaeus sp.) hepatopancreas isolate | Sinaloa, Mexico/1999 | CAIM | CGH/MLSA |
| CAIM 519Td | campbellii | Seawater isolate | Hawaii, USA/2005 | CAIM | CGH/MLSA |
| CAIM 1500 | campbellii | Snapper (Lutjanus guttatus) liver isolate | Sinaloa, Mexico/1972 | CAIM | CGH/MLSA |
| 2SA4 | campbellii | Healthy coral (P. dilatata) isolate | Abrolhos bank, Brazil/2007 | UFRJ | CGH/MLSA |
| 42A | campbellii | Healthy coral (M. hispida) isolate | Abrolhos bank, Brazil/2007 | UFRJ | CGH/MLSA |
| AND4 | campbellii | Surface water isolate | Andaman Sea, Indonesia/2000 | GenBank | MLSA |
| CAIM 577Te | rotiferianus | Rotifer (Brachionus plicatilis) water isolate | Ghent, Belgium/1999 | CAIM | MLSA |
| CAIM 994 | rotiferianus | Snapper (L. guttatus) kidney isolate | Sinaloa, Mexico/2004 | CAIM | CGH/MLSA |
| 1975 | rotiferianus | Snapper (Pagrus auratus) isolate | Unknown/1999 | UFRJ | MLSA |
| F5828 | parahaemolyticus | O3:K6 human isolate | Texas, USA/1998 | CDC | CGH/MLSA |
| RIMD2210633 | parahaemolyticus | O3:K6 human isolate | Osaka, Japan/1996 | GenBank | MLSA |
| 40B | alginolyticus | Diseased coral (M. braziliensis) isolate | Abrolhos bank, Brazil/2007 | UFRJ | CGH/MLSA |
| R-1249 | alginolyticus | Coral (Fungia sp.) yellow band lesion isolate | Sulawesi, Indonesia/2004 | PU | MLSA |
a
Type strain. Vibrio trachuri is a junior synonym of V. harveyi (Thompson et al., 2002).
b
Type strain. Vibrio carchariae is a junior synonym of V. harveyi (Pedersen et al., 1998).
c
Type strain. Vibrio harveyi.
d
Type strain. Vibrio campbellii ATCC 25920.
e
Type strain. Vibrio rotiferianus.
f
Also known as strain BB120 (Bassler et al., 1997).
CAIM, Collection of Aquatic Important Microorganisms (http://www.ciad.mx/caim); ATCC, American Type Culture Collection (http://www.atcc.org); UWM, University of Wisconsin-Milwaukee; CDC, Centers for Disease Control and Prevention, USA; UFRJ, Federal University of Rio de Janeiro; PSA, Prince of Songkla University; PU, Pace University.