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. 2010 Jul 29;6(7):e1001043. doi: 10.1371/journal.pgen.1001043

Figure 2. Array methylation is validated by Sequenom EpiTYPER.

Figure 2

Results from GoldenGate array methylation values are plotted versus Sequenom EpiTYPER quantitative methylation values. (A) Sequenom FES methylation is significantly correlated with GoldenGate methylation average β at the coordinate array CpG (Spearman correlation rho = 0.68, P = 1.1E-12, n = 85). (B) Sequenom P2RX7 methylation is significantly correlated with GoldenGate methylation average β at the coordinate array CpG (rho = 0.65, P = 8.6E-12, n = 88). (C) Sequenom HSD17B12 methylation is significantly correlated with GoldenGate methylation average β at the coordinate array CpG (rho = 0.34, P = 5.4E-05, n = 137). (D) Sequenom GSTM2 methylation is significantly correlated with GoldenGate methylation average β at the coordinate array CpG (rho = 0.83, P<2.2E-16, n = 140).