Table 6. Glycoprotein integrations sites.
Specie | Total Number of BLAST hits | Hits that have no retroviral gag, pol, and LTR elements1) | Virus2) | Glycoprotein residues | BLAST E-value and percent identity |
Human | 1 | chr1: 46259885–46260178 | Bornavirus | 32–126 | 1E-07/37% |
Chimp | 1 | chr1: 46259885–46260178 | Bornavirus | 32–126 | 6E-08/38% |
Baboon | 1 | on several partial scaffolds | Bornavirus | 6–155 | 3E-13/38% |
Gorilla | 1 | gene scaffold 2544: 11117–11408 | Bornavirus | 59–155 | 6E-11/43% |
Macaque | 1 | chr1: 48,422,406–48,422,783 | Bornavirus | 6–126 | 1E-10/35% |
Tarsier | 7 | scaffold 99624:1,564–1,884 | Reston Ebolavirus | 497–610 | 2E-11/30% |
Kangaroo rat | 1 | scaffold 40120: 1783–2128 | Marburgvirus | 509–628 | 4E-08/40% |
Stickleback | 1 | chrVIII: 8,031,996–8,032,262 | Reston Ebolavirus | 533–628 | 2E-07/32% |
Shrew | 4 | scaffold 231484:15,984–16,259 | Reston Ebolavirus | 559–648 | 3E-06/29% |
Horse | 13 | chr10: 13,359,493–13,359,900 | Reston Ebolavirus | 508–652 | 3E-06/27% |
Zebrafish | 10 | chr15: 6,268,907–6,269,284 | Sudan Ebolavirus | 516–651 | 3E-05/27% |
zv8_NA3400: 7,797–8.099 | Reston Ebolavirus | 519–628 | 2E-07/32% | ||
Tetraodon | 1 | chr1:15,715,939–15,716,202 | Zaire Ebolavirus | 532–626 | 1E-06/29% |
Fugu | 1 | chrUn:120,943,623–120,943,895 | Zaire Ebolavirus | 530–627 | 1E-07/31% |
Sloth | 4 | None | |||
Cow | 1 | None | |||
Squirrel | 1 | None | |||
Platypus | 3 | None | |||
Chicken | 8 | None | |||
Zebrafinch | 21 | None |
All regions were tested for nearby gag, pol, and LTR elements to eliminate sequences of retroviral origin, as described in the methods section.
Only the most similar strain of virus is shown for filovirus-like integrations.