Table 3.

popGenHMM Parameter Estimates “States” Refers to the Number of States in the popGenHMM Trained

States	Chrom	θ	α
2	X	0.01087	− 104.994
2	2L	0.0074	− 22.908
3	X	0.0041	− 20.026, 2.779
3	2L	0.0043	− 9.95, 0.927

NOTE.—Chrom is the chromsome from which the data come. θ is the mutation parameter shared between states in the model. α refers to the selection coefficient or set of selection coefficients for the selection parameters of the model.