Table 3. Parameter definitions and nominal values.
| Parameter | Description | Valuea |
|
Initiation rate for PhilD and PhilC promoter | 2.0 hr−1 |
|
Basal activity for PhilD promoter | 1.2 N hr−1 |
|
Basal activity for PhilE promoter | 12.0 N hr−1 |
|
Basal activity for PhilC promoter | 0.4 N hr−1 |
|
Activity for PhilD promoter | 16.0 N hr−1 |
|
Activity for PhilC promoter | 10.0 N hr−1 |
|
Activity for PrtsA promoter | 8.0 N hr−1 |
|
Activity for PhilA promoter | 6.0 N hr−1 |
|
HilD degradation/dilution rate | 4.0 hr−1 |
|
HilE degradation/dilution rate | 8.0 hr−1 |
|
HilC degradation/dilution rate | 4.0 hr−1 |
|
RtsA degradation/dilution rate | 4.0 hr−1 |
|
HilA degradation/dilution rate | 4.0 hr−1 |
|
HilE-HilD degradation/dilution rate | 16.0 hr−1 |
|
Reporter degradation/dilution rate | 4.0 hr−1 |
|
Association rate of HilD and HilE | 8.0 N−1 hr−1 |
|
Disassociation rate of HilE-HilD complex | 8.0 hr−1 |
|
Equilibrium constant for HilD- complex |
10.0 N−1 |
|
Equilibrium constant for HilC- complex |
0.001 N−1 |
|
Equilibrium constant for RtsA- complex |
0.001 N−1 |
|
Equilibrium constant for HilD- complex |
1.0 N−1 |
|
Equilibrium constant for HilC- complex |
0.1 N−1 |
|
Equilibrium constant for RtsA- complex |
0.1 N−1 |
|
Bandwith for density estimation | 0.05 N |
a
We are unable to assign absolute concentrations units to the parameter values. As a consequence, we report the parameters in terms of dimensionless concentration units, denoted by N.