Table 2.
Conditions for Primers used in QPCR assay
genome | amplicon size |
cycles | Temp (°C) |
Primer concentrationcon (μm, each) |
MgO(Ac)2 centration (μm) |
---|---|---|---|---|---|
C. elegans | |||||
nuclear | 13.7 kb | 21 | 68 | 0.4 | 1.2 |
nuclear | 9.3 kb | 20 | 68 | 0.4 | 1.2 |
nuclear | 225 bp | 23 | 63 | 0.4 | 1.2 |
mitochondrial | 10.9 kb | 16 | 66 | 0.4 | 1.2 |
mitochondrial | 195 bp | 18 | 63 | 0.3 | 1.2 |
D. melanogaster | |||||
nuclear | 11.5 kb | 22 | 67 | 0.4 | 1.2 |
nuclear | 10.3 kb | 22 | 67 | 0.4 | 1.2 |
nuclear | 152 bp | 24 | 65 | 0.4 | 1.2 |
mitochondrial | 14.2 kb | 17 | 66 | 0.4 | 1.2 |
mitochondrial | 151 bp | 19 | 61 | 0.4 | 1.2 |
Adenovirus type 2 | |||||
1 kb | 18-19 | 65 | 0.4 | 1.2 | |
F. heteroclitus (Atlantic killish) | |||||
nuclear | 11.5 kb | 24 | 68 | 0.4 | 1.1 |
nuclear | 234 bp | 24 | 62 | 0.4 | 1.2 |
mitochondrial | 9.4 kb | 16 | 65 | 0.4 | 1.2 |
mitochondrial | 264 bp | 24 | 62 | 0.4 | 1.2 |
D. rerio (zebrafish) | |||||
nuclear | 10.7 kb | 24 | 69 | 0.4 | 1.05 |
nuclear | 233 bp | 27 | 60 | 0.4 | 1.2 |
mitochondrial | 10.3 kb | 19 | 68 | 0.4 | 1.2 |
mitochondrial | 198 bp | 21 | 62 | 0.4 | 1.2 |