Table 2.
Hot residues determined by PRS analysis
Transition | PDB code | Hot residues∗ |
---|---|---|
GroEL | ||
T→R | 1AON (chain H) → 2C7E (chain A) | 2, 6, 7, 9, 11, 13, 14, 17, 19, 21, 29, 31, 37, 38, 63, 65, 67, 72, 75, 77, 79, 132, 133, 135, 136, 139, 186, 187, 190–93, 209, 221, 224, 227, 230, 234, 254, 256, 264, 268, 272, 275, 303, 334, 341, 346, 348, 362, 377, 411–414, 417, 418, 453, 455, 456, 459, 461, 464, 467–479, 481–483, 485–493, 506, 508, 518, 521, 523–525 |
R″→T | 1AON (chain A) → 1GR5 (chain A) | 5, 6, 9–12, 16–18, 20, 21, 23, 46, 60, 66, 69, 71–73, 90–92, 93, 95, 96, 100, 107, 110, 142, 143, 145, 158, 166, 169, 172, 174, 187, 196, 198, 213, 225, 226, 231, 232, 237, 238, 240–248, 252, 256, 258, 261, 265–268, 271–273, 275, 276, 281, 288, 289, 351–353, 355–359, 362, 363, 367, 375, 380, 387, 402, 450, 522, 525 |
ADK | ||
Open→closed | 4AKE→1AKE | 1–3, 6, 9, 11–13, 17–21, 24, 25, 27–48, 50, 51, 57, 63–86, 90, 93–95, 98–104, 108, 110–113, 115–117, 119, 121, 122, 124, 126, 127, 129–132, 139, 142, 145, 146, 148, 151–155, 158, 159, 165, 167, 170, 173–180, 185, 188, 191, 197, 198, 200, 205 |
Closed→open | 1AKE→4AKE | 55, 128, 133, 135, 147, 151–155, 167 |
Residues that yield overlaps >0.7 for GroEL, 0.6 for ADK (open→closed), and 0.5 for ADK (closed→open) in PRS analysis (averaged over 10 runs).