Table 2.
Identity of the 11 gene segments of N155 to the corresponding gene segments of strain I321 and other human and bovine rotavirus strains.
| Gene segment | I321 |
Human strainsa |
Bovine strains |
Origin of segment in N155 | |||
|---|---|---|---|---|---|---|---|
| % similarity | Accession no. | % similarity | Accession no. (strain) | % similarity | Accession no. (strain) | ||
| VP1 | NA | 86 | DQ490551 (RV176-00) | 93 | DQ870493 (NCDV) | Bovine | |
| VP2 | NA | 85 | DQ870486 (S2) | 94 | DQ870494 (NCVD) | Bovine | |
| VP3 | NA | 84 | AY277914 (DS1) | 92 | AY300923 (UKtc) | Bovine | |
| VP4 | 95 | L07657 | NA-P[11] | 92 | M92986 (B223) | Bovine | |
| VP6 | 97 | X94618 | 87 | DQ870507 (DS-1) | 94 | AB040055 (22R) | Bovine |
| VP7 | 93 | L07658 | 88 | X63156 (A64) | 90 | D01056 (KK3) | Bovine |
| NSP1 | 97 | U08418 | 89 | X59297 (IGV-80-3) | 84 | DQ494395 (KJ75) | Human |
| 89 | L18943 (Wa) | ||||||
| NSP2 | 81 | Z47975 | 95 | DQ146656 (Dhaka25-02) | 89 | DQ494402 (KJ75) | Human |
| 92 | L04534 (Wa) | ||||||
| NSP3 | 95 | X81433 | 96 | X81436 (ST3) | 88 | DQ494404 (KJ75) | Human |
| 94 | X81434 (Wa) | ||||||
| NSP4 | 95 | AY527229 | 89 | AB211989 (RMC/R139) | 95 | AF166353 (CBNU-1) | Bovine |
| 83 | K02032 (Wa) | ||||||
| NSP5 | NA | 92 | AB008658 (M318) | 95 | M33606 (VMRI) | Bovine | |
| 86 | V01191 (Wa) | ||||||
NA: sequence data not available in GenBank, NA-P[11]: P[11] VP4 sequences detected in humans are likely to be zoonotic transmissions.
a
Sequences from strains isolated from humans but for which there is reported evidence of zoonotic transmission and/or reassortment were excluded for homology comparisons.