Table 1. Altered transcripts in TMSC and TE as compared to TN.
| Gene symbols | Gene ID# | Fold Change | Gene symbols | Gene ID# | Fold Change | Gene symbols | Gene ID# | Fold Change | |||
|---|---|---|---|---|---|---|---|---|---|---|---|
| TMSC/TN | TE/TN | TMSC/TN | TE/TN | TMSC/TN | TE/TN | ||||||
| Effector function | Glycolysis / Gluconeogenesis | mTOR pathway | |||||||||
| Gzmb | 14939 | 38.3 | 306.4 | Hk2 | 15277 | 2 | 7.1 | Rps6kb2 | 58988 | 2.7 | |
| Ifng | 15978 | 4.2 | 211 | Tpi1 | 21991 | 1.9 | 4.1 | Akt1 | 11651 | 2.1 | |
| Fasl | 14103 | 66.3 | Eno3 | 13808 | 4 | Eif4e2 | 26987 | 2 | |||
| Klrk1 | 27007 | 2.9 | 3.3 | Gapdh | 14433 | 1.5 | 3.8 | Rps6ka1 | 20111 | 1.7 | |
| Prf1 | 18646 | 3 | Acyp2 | 75572 | 1.8 | 2.4 | Eif4b | 75705 | -1.9 | ||
| Tnfsf10 | 22035 | 2.7 | Pfkp | 56421 | 1.5 | 1.9 | Tsc1 | 64930 | -2 | ||
| Klra3 | 16634 | 2.3 | Bpgm | 12183 | 1.6 | Rps6ka2 | 20112 | -2.9 | |||
| Chemokine-chemokine receptor interactions | MAPK signaling pathway | Adhesion and trans-endothelial migration | |||||||||
| Ccl5 | 20304 | 15.9 | 453.5 | Stmn1 | 16765 | 5 | 19.3 | Cd44 | 12505 | 14.2 | |
| Ccl4 | 20303 | 69.6 | Dusp1 | 19252 | 1.8 | 4.9 | Hmmr | 15366 | 7.2 | ||
| Ccl3 | 20302 | 42 | Map3k8 | 26410 | 7.6 | 3.4 | Itgb1 | 16412 | 5.6 | ||
| Ccr5 | 12774 | 4.7 | 32.8 | Gadd45b | 17873 | 3.2 | Spp1 | 20750 | 4.5 | ||
| Ccr2 | 12772 | 10.8 | Gadd45g | 23882 | 15.3 | 2.7 | Itga4 | 16401 | 2.7 | ||
| Cxcr3 | 12766 | 4.1 | 8.3 | Dusp3 | 72349 | 1.8 | 2.5 | Sdc4 | 20971 | 2.5 | |
| Cx3cr1 | 13051 | 4.8 | Mapkapk2 | 17164 | 1.8 | Itgav | 16410 | 2.4 | |||
| Xcl1 | 16963 | 4.7 | Mapk3 | 26417 | 1.8 | Lamc1 | 226519 | 2 | |||
| Cxcl10 | 15945 | 3.1 | Map2k3 | 26397 | 1.7 | Itga3 | 16400 | 2 | |||
| Cxcl10 | 15945 | 3.1 | Mapk8 | 26419 | -1.6 | Npnt | 114249 | 1.9 | |||
| Ccr6 | 12458 | 2.9 | Mapk14 | 26416 | -1.6 | Itgb2 | 16414 | 1.9 | |||
| Ccl6 | 20305 | 2.7 | Map2k6 | 26399 | -1.6 | Vcl | 22330 | 1.7 | |||
| Ccr7 | 12775 | -29.1 | Dusp2 | 13537 | -1.6 | Tnc | 21923 | 1.6 | |||
| Cytokine-cytokine receptor interactions | Jak-STAT signaling pathway | Pxn | 19303 | 1.5 | |||||||
| Il10ra | 16154 | 1.7 | 9.9 | Pim1 | 18712 | 2.3 | 2.3 | Apoptosis | |||
| Csf1 | 12977 | -2 | 6.4 | Jak3 | 16453 | 1.8 | 1.9 | Casp3 | 12367 | 5.4 | |
| Il2rb | 16185 | 1.7 | 6.3 | Socs5 | 56468 | -1.7 | -1.7 | Capn2 | 12334 | 2.3 | |
| Il10 | 16153 | 6.1 | Stat6 | 20852 | -1.7 | Bid | 12122 | 2.2 | |||
| Csf2 | 12981 | 4.7 | Stat1 | 20846 | 2 | -1.8 | Apaf1 | 11783 | 2.2 | ||
| Il15ra | 16169 | 2 | 2.5 | Jak1 | 16451 | -1.5 | -1.8 | Casp7 | 12369 | 2.1 | |
| Il12rb1 | 16161 | 1.9 | 2.5 | Socs3 | 12702 | 2.6 | -2.4 | Bax | 12028 | 1.8 | |
| Il4ra | 16190 | -2.8 | Socs1 | 12703 | 1.9 | Bcl2l1 | 12048 | 1.6 | |||
| Il6st | 16195 | -1.6 | -4.3 | Myc | 17869 | 1.5 | Bad | 12015 | 1.5 | ||
| Il7r | 16197 | -1.9 | -7.3 | Toll-like receptor signaling pathway | Bcl2 | 12043 | 2 | -1.5 | |||
| Il6ra | 16194 | -18.6 | Tlr7 | 170743 | 2.6 | Trp53 | 22059 | 1.9 | |||
| Il10rb | 16155 | 1.6 | Tlr6 | 21899 | 1.5 | ||||||
| TCR signaling | TCR signaling | TCR signaling | |||||||||
| Tbx21 | 57765 | 8.8 | 21.5 | Cdc42 | 12540 | 1.6 | Ikbkb | 16150 | -2.5 | ||
| Map3k8 | 26410 | 7.6 | 3.4 | Hras1 | 15461 | 1.5 | 1.5 | Pak1 | 18479 | -5.8 | |
| Nfatc1 | 18018 | 2.6 | Ikbkg | 16151 | -1.5 | Pdk1 | 228026 | -6.3 | |||
| Fyn | 14360 | 2.1 | Itk | 16428 | -1.5 | -2 | Jun | 16476 | 6.1 | ||
| Ppp3cc | 19057 | 1.6 | 1.7 | Map3k14 | 53859 | -1.5 | -2.2 | Fos | 14281 | 4 | |
| Zap70 | 22637 | 1.7 | Tec | 21682 | -2.5 | Lcp2 | 16822 | -1.6 | |||