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. Author manuscript; available in PMC: 2011 Jun 1.
Published in final edited form as: Biol Blood Marrow Transplant. 2010 Jan 29;16(6):751–771. doi: 10.1016/j.bbmt.2010.01.012

Table 4. NSC-related genes that are activated in CD8+ TE.

Gene symbol Gene ID# Fold Change Gene symbol Gene ID# Fold Change Gene symbol Gene ID# Fold Change Gene symbol Gene ID# Fold Change Gene symbol Gene ID# Fold Change
TMSC/TN TE/TN TMSC/TN TE/TN TMSC/TN TE/TN TMSC/TN TE/TN TMSC/TN TE/TN
Cell cycle DNA replication/Repair Receptor/Signal transduction Transport (Protein/Ion) Transcription/Transcription regulation
Ccnb2 12442 3.64 29.94 Rrm2 20135 9.19 60.07 Epas1 13819 7.54 Sypl 19027 4.33 Mdfic 16543 2.77 18.58
Ccna2 12428 3.31 21.13 Cdc6 23834 5.09 21.54 Rhoc 11853 6.85 Kif20a 19348 4.26 Uhrf1 18140 2.89 9.26
Cdca5 67849 4.46 19.44 Dtl 76843 4.19 18.32 Rhoq 104215 1.69 5.32 Syt11 229521 2.9 3.88 Hells 15201 1.91 7
Ccnb1 268697 2.28 16.85 Uhrf1 18140 2.89 9.26 Arl5a 75423 3.8 Snx10 71982 1.97 2.74 Ezh2 14056 6.95
Sgol1 72415 11.04 Dna2l 327762 1.68 7.48 Hif1a 15251 3.71 Slc35b2 73836 2.61 Tacc3 21335 6.06
E2f8 108961 10.39 Lig1 16881 5.73 Nudt1 17766 1.66 2.53 Clic4 29876 2.31 2.56 Eomes 13813 1.61 5.7
Chek1 12649 2.6 10.34 Rpa2 19891 4.52 Sap30 60406 2.5 Pdzd11 72621 1.66 2.25 Csda 56449 5.52
Cks1b 54124 2.58 9.51 Rfc3 69263 1.6 4.27 Dusp16 70686 2.3 Slc35b1 110172 2.15 Cenpk 60411 4.51
Cdkn1a 12575 9.17 Rrm1 20133 4.18 Dtymk 21915 1.65 2.21 Dbi 13167 2.11 Nsbp1 50887 3.85
Plk1 18817 7.54 Mcm5 17218 4.07 Gpr56 14766 2.08 Lman1 70361 1.98 Klf10 21847 2.98
Aspm 12316 7.53 Smc2 14211 3.55 Akt1 11651 2.07 Vps54 245944 1.94 Wdhd1 218973 2.85
Ect2 13605 6.86 Fen1 14156 3.43 Arl1 104303 2.07 Gipc1 67903 1.55 1.93 Sub1 20024 2.62
Cdkn2c 12580 2.13 6.27 Prim1 19075 3.42 Arhgap21 71435 2 Arf4 11843 1.87 Pmf1 67037 2.45
Itgb1 16412 5.58 Mcm2 17216 1.56 3.4 Tank 21353 1.95 Mtch2 56428 1.86 Myef2 17876 2.09
Gmnn 57441 2.1 5.33 Hmgn2 15331 3.37 Fut8 53618 1.91 Snx5 69178 1.77 1.85 Rab8b 235442 2.09
Cdc45l 12544 1.68 5.13 Mcm7 17220 2.94 Rbl1 19650 1.83 Clcn5 12728 1.85 Gtf2e2 68153 1.99
Cdkn2b 12579 4.89 Prim2 19076 2.76 Tmpo 21917 1.82 Vps29 56433 1.83 Inppl1 16332 1.98
Cdc25c 12532 4.72 Rfc5 72151 2.7 Ptprj 19271 1.74 Rrbp1 81910 1.8 Cdca7l 217946 1.8 1.97
Pola1 18968 1.59 4.55 Mcm3 17215 2.7 Csnk2b 13001 1.73 Trappc1 245828 1.79 Tceb1 67923 1.95
Aurka 20878 4.47 Mcm4 17217 2.59 Ranbp5 70572 1.72 Ssr2 66256 1.73 Hnrpdl 50926 1.72 1.78
Ccnf 12449 3.96 Orc6l 56452 2.44 Gnb1 14688 1.69 Slc33a1 11416 1.72 Polr3k 67005 1.77
Gsg2 14841 1.75 3.11 Rfc4 106344 2.4 Dck 13178 1.66 Vps45 22365 1.72 Bzw1 66882 1.68
Dlg7 218977 2.72 Recql 19691 1.71 2.28 Ddx1 104721 1.65 Atp6v0a2 21871 1.71 Cnot7 18983 1.63
Nfatc1 18018 2.51 Rpa3 68240 2.22 Inhbb 16324 1.64 Slc4a7 218756 1.69 Sin3b 20467 1.63
Ran 19384 1.89 Smc6 67241 2.15 Tyms 22171 1.63 Slc39a6 106957 1.65 Mtdh 67154 1.57
Ccng1 12450 1.84 Hat1 107435 2.15 Aaas 223921 1.59 Bcap29 12033 1.61 1.65 Th1l 57314 1.53
Erh 13877 1.67 1.74 Blm 12144 1.97 Smap1 98366 1.58 Nup93 71805 1.62 Microtubule-based process
Rb1 19645 1.72 Topbp1 235559 1.96 Rab1 19324 1.53 Sfxn1 14057 1.7 1.57 Kif2c 73804 3.23 20.24
Psmd1 70247 1.69 Hmgb1 15289 1.82 Asna1 56495 1.53 Timm17b 21855 1.57 Kif11 16551 1.82 7.9
Cops5 26754 1.64 Ube2n 93765 1.64 Nudt5 53893 1.52 Kpna3 16648 1.56 Kif22 110033 2.33 7.45
Mapre1 13589 1.6 Smarcad1 13990 1.57 Cytokinesis Slc25a10 27376 1.56 Kif4 16571 3.58
Rap1a 109905 1.53 Prc1 233406 1.86 12.05 Kdelr2 66913 1.56 Mid1ip1 68041 2.07
Cks2 66197 4.85 11.65 Sec14l1 74136 1.54 Nde1 67203 2.04
Incenp 16319 4.68 Kif23 71819 1.68
Metabolism Ubiquitin/Proteolysis/Proteasome Skap2 54353 1.76 2.09 Chromatin modification/Assembly Pnkd 56695 2.29
Gldc 104174 23.94 Cdc20 107995 5.27 Protein phosphorylation Nusap1 108907 1.86 Mpdu1 24070 1.85 2.29
Brca1 12189 2.04 5.87 Capn2 12334 2.34 Melk 17279 4.05 17.84 Mad2l1 56150 1.61 Ipp 16351 2.25
Gpd2 14571 4.17 Xpnpep1 170750 2.32 Bub1 12235 7.69 Asf1b 66929 Tmem97 69071 2.24
Lycat 225010 3.06 Ide 15925 2.28 Wee1 22390 2.07 6.06 Nek2 18005 Pls3 102866 2.16
Gcat 26912 2.71 Psma1 26440 1.99 Ddr1 12305 2.26 5.82 Cbx5 12419 Dek 110052 2.16
Azin1 54375 2.29 Psmb1 19170 1.88 Stk39 53416 1.51 5.32 Pvt1 19296 1.57 Lancl2 71835 2.15
Pkm2 18746 2.19 Ube2l3 22195 1.82 Ryk 20187 5.21 Suv39h2 64707 Pqlc3 217430 2.14
Idh3a 67834 2 Blmh 104184 1.71 Plk4 20873 1.54 4.75 Cbx1 12412 Phlda3 27280 2.1
Gyg 27357 1.98 Ube2t 67196 1.64 Ttk 22137 3.62 Nap1l1 53605 Pih1d1 68845 1.59 2.03
Hmgcr 15357 1.96 Psmb4 19172 1.64 Mapk6 50772 2.07 Translation Anp32e 66471 1.96
Rpe 66646 1.86 Psmc2 19181 1.63 Cdk2 12566 1.87 Farsb 23874 4.68 Tmem30a 69981 1.92
Sdhb 67680 1.8 Ube2e3 22193 1.63 Commd1 17846 1.81 Lamp2 16784 2.63 3.48 Prdx1 18477 1.91
Acsl5 433256 1.79 Psmb5 19173 1.62 Ptp4a2 19244 1.74 Mrpl27 94064 1.84 2.41 Mlf2 30853 1.88
Lypla1 18777 1.79 Psmd6 66413 1.57 Rps6ka1 20111 1.73 Eif4e2 26987 1.52 2.04 Hccs 15159 1.85
Decr1 67460 1.79 Psma3 19167 1.55 Ptpn9 56294 1.59 Eif1ay 66235 1.86 Actb 11461 1.84
Gstt1 14871 1.78 Psma5 26442 1.55 Ppp5c 19060 1.53 1.58 Mrpl13 68537 1.71 Tex9 21778 1.8
Ywhah 22629 1.74 RNA processing Acp1 11431 1.56 Mrpl18 67681 1.69 Rcn1 19672 1.6 1.77
Gusb 110006 1.72 Syncrip 56403 1.79 2.88 Inhibitory signal/Apoptosis Eif3s1 78655 1.63 Nubp1 26425 1.59 1.74
Soat1 20652 1.65 Slbp 20492 2.76 Lgals1 16852 3.91 27.4 Mrpl16 94063 1.52 Psmc3ip 19183 1.71
Aytl2 210992 1.65 Hnrpll 72692 2.73 Birc5 11799 5.33 21.6 Miscellaneous Pdap1 231887 1.69
Aco1 11428 1.58 Thoc4 21681 2.21 Casp3 12367 5.37 Fignl1 60530 3.2 15.73 Arpc5 67771 1.67
Pcyt1a 13026 1.57 Cpsf2 51786 2.02 Gas2 14453 4.73 Trip13 69716 1.88 8.69 Ranbp1 19385 1.67
Electron transport Ncbp2 68092 1.9 2.01 Dap 223453 2.37 Pcbp4 59092 6.39 Tmem77 67171 1.65
Acadl 11363 5.27 Snrpa1 68981 1.91 Bcl7c 12055 2.23 Sh3bgrl 56726 4.77 Pon2 330260 1.65
Pdia6 71853 1.6 2.42 Cstf3 228410 1.84 Api5 11800 2.16 Lxn 17035 4.32 Nup85 445007 1.62
Gsr 14782 2.06 Rod1 230257 1.79 Casp7 12369 2.14 Capg 12332 1.95 4.17 Ppp1r7 66385 1.62
Cyp51 13121 1.94 Sfrs3 20383 1.71 Phlda1 21664 1.94 Ltb4dh 67103 4.01 Sephs2 20768 1.61
Uqcrb 67530 1.92 Cops2 12848 1.7 Bax 12028 1.84 Gtse1 29870 3.59 Zdhhc6 66980 1.59
Glrx 93692 1.87 Lsm5 66373 1.7 Bnip2 12175 1.51 Tipin 66131 3.5 Pdia3 14827 1.58
Txnl1 53382 1.81 Sfrs2 20382 1.65 Cell adhesion/Communication Ccdc99 70385 2.81 Mgat2 217664 1.56
Cyb5b 66427 1.7 Sfrs1 110809 1.61 Itgb1 16412 5.58 Mtm1 17772 2.71 Psmd7 17463 1.84 1.54
Sqle 20775 1.69 Regulation of cell growth/Proliferation Adam19 11492 4.89 Wbp5 22381 2.42 Psmc1 19179 1.54
Txndc4 76299 1.6 Scin 20259 3.06 Adam9 11502 2.82 Acyp2 75572 1.75 2.41 Asah1 11886 1.53
Cyb5r3 109754 1.57 Chpt1 212862 2.36 Tnc 21923 1.94 1.56 Nucks1 98415 2.3 Peci 23986 1.53