Table 3.
Statistical variables of the performance of a binary classification test
| Acronym | Full name | Definition/Formula |
|---|---|---|
| TP | True positive | Toxic compounds predicted as toxic |
| TN | True negative | Non toxic compounds predicted as non toxic |
| FP | False positive | Non toxic compounds predicted as toxic |
| FN | False negative | Toxic compounds predicted as non toxic |
| FP% | False positive rate | Ratio of non toxic compounds incorrectly classified as toxic FP/(FP + TN) |
| FN% | False negative rate | Ratio of toxic compounds incorrectly classified as non toxic FN/(FN + TP) |
| Sensitivity | Sensitivity or true positive rate | Ratio of toxic compounds correctly classified as toxic TP/(TP + FN) |
| Specificity | Specificity or true negative rate | Ratio of non toxic compounds correctly classified as non toxic TN/(FP + TN) |
| Accuracy | Accuracy or concordance | Proportion of the total number of predictions that were correct (TP + TN)/(TP + TN + FP + FN) |
| PPV | Positive predictive value | Ratio of the predicted toxic compounds that were correct TP/(TP + FP) |
| NPV | Negative predictive value | Ratio of the predicted non toxic compounds that were correct TN/(TN + FN) |