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. Author manuscript; available in PMC: 2011 Jan 1.
Published in final edited form as: AIDS. 2010 Jan 28;24(3):411–416. doi: 10.1097/QAD.0b013e3283350eef

Table 2.

Hydrophobicity and chemical classifications of six different residues between subtype AE consensus and subtype B consensus sequences.

Residue Subtype B Hydro-phobicity* Chemical classifications Subtype AE Hydro-phobicity* Chemical classifications
13 I 1 Aliphatic group V 1 Aliphatic group
35 E 4 Negative charge D 4 Negative charge
36 M 2 Sulphur containing group I 1 Aliphatic group
41 R 5 Positive charge K 4 Positive charge
69 H 4 Positive charge K 4 Positive charge
89 L 1 Aliphatic group M 2 Sulphur containing group
*

Hydrophobicity 1 to 5 = from the highest hydrophobicity to the least hydrophobicity.