TABLE 1.
Role of residue | MarA mutation | % Repression |
% Activation |
|||||||
---|---|---|---|---|---|---|---|---|---|---|
Type 1 |
Type 2 | Class I |
Class II |
|||||||
purA | hdeA | rob | fpr | mar | zwf | fumC | inaAb | micF | ||
Binds αCTD | Trp19Ala | 10 | 40 | 30 | 0 | — | 5c | 5c | — | 10 |
Relatively activation | Arg36Ala | 95 | >100 | 110 | — | — | 35 | — | 50 | — |
specific | Thr12Ala | 90 | 95 | 85 | 15 | 45 | 15 | 15 | 30 | 30 |
Thr95Ile | 70 | 50 | 70 | 0 | 50 | 10 | −10 | 5 | 0 | |
Pro106Ala | 40 | 55 | 25 | 0 | 5 | 0 | 0 | — | 0 |
Assays were performed in duplicate or triplicate (see Materials and Methods) except where noted. Values (±10%) are given to the nearest 5% and are normalized to the results for wild-type MarA as 100% repression or activation. Specifically, the percent repression by a MarA protein is determined by the equation [(P − M)/P]100 and the percent activation by a MarA protein is determined by the equation [(M − P)/P]100, where P and M are the LacZ activities of cells containing pMPM9 (completely inactive MarA control) and the MarA protein in question, respectively. Finally, the values in the table were obtained by normalizing the percent for a MarA mutant to that of wild-type MarA, set as 100%. —, not determined.
One experiment, two points.
Two experiments, one point each; negative control has plasmid pMPM-T6Ω instead of pMPM9.