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. 2010 Aug 5;6(8):e1001048. doi: 10.1371/journal.pgen.1001048

Table 1. List of genes for which RNAi induced gcs-1 expression in the intestine.

Functional group Gene ID Function (NCBI-KOGs description)
Glutathione regeneration C46F11.2 mitochondrial glutathione reductase
Glutathione synthesis E01A2.1 Glutamate-cysteine ligase regulatory subunit
Pentose phosphate pathway B0035.5 gspd-1, Glucose-6-phosphate 1-dehydrogenase
Pentose phosphate pathway F01G10.1 tkt-1,Transketolase
Pentose phosphate pathway Y57G11C.3 6-phosphogluconolactonase - like protein
Fatty acid oxidation F09F7.4 Enoyl-CoA hydratase
Fatty acid oxidation T05G5.6 ech-6, Enoyl-CoA hydratase
Translation F54H12.6 Elongation factor 1 beta/delta chain
Translation T27F7.3b eif-1, Translation initiation factor 1 (eIF-1/SUI1)
Translation C36E8.1 RNA polymerase I transcription factor
Translation C48B6.2 U3 small nucleolar ribonucleoprotein (snoRNP) component
Translation Y47 D3A.16 rsks-1, Ribosomal protein S6 kinase
Protein folding & degradation T21B10.7 cct-2, Chaperonin complex component
Protein folding & degradation C17G10.2 Hsp90 co-chaperone CNS1 (contains TPR repeats)
Protein folding & degradation T06D8.8 rpn-9, 26S proteasome regulatory complex
Protein folding & degradation D1054.3 Suppressor of G2 allele of skp1
COP9 signalosome Y59A8A.1 csn-1
COP9 signalosome B0025.2 csn-2
COP9 signalosome Y38C1AA.2 csn-3
COP9 signalosome Y55F3AM.15 csn-4
COP9 signalosome B0547.1 csn-5
COP9 signalosome Y67H2A.6 csn-6
COP9 signalosome K08F11.3 cif-1, COP9 Signalosome and eIF3 complex shared subunit
DNA repair & degradation Y116A8C.34 cyn-13, Cyclophilin-type peptidyl-prolyl cis-trans isomerase
DNA repair & degradation Y47G6A.8 crn-1, 5′-3′ exonuclease
DNA repair & degradation Y71H10B.1 IMP-GMP specific 5′-nucleotidase
Other genes C10E2.6 Monocarboxylate transporter
Other genes K10C2.4 phi-43, Fumarylacetoacetase
Other genes F54D8.3 alh-1, Aldehyde dehydrogenase
Other genes R07E5.10 pdcd-2, mammalian Programmed Cell Death Protein homolog
Other genes D2030.9 wdr-23, WD40 repeat-containing protein
Other genes F30A10.9 Predicted nucleic-acid-binding protein, contains PIN domain
Other genes C08B11.2 hda-2, Histone Deacetylase
Other genes F30B5.4 Similar to oxidative stress-induced growth inhibitor 2 in H. sapiens
Other genes M01B12.5 riok-1, Similar to serine/threonine kinase RIO1.
Unknown function Y41C4A.9 Uncharacterized conserved protein
Unknown function Y42G9A.1 Unknown function
Unknown function F20H11.6 Unknown function
Unknown function M01E5.4 Unknown function
Unknown function Y87G2A.1 Unknown function
Unknown function Y57E12AL.6 Unknown function

The RNAi screen identified 37 of these genes, and four were identified subsequently by virtue of their being COP9 signalosome subunits (csn-2, csn-3, csn-6, cif-1; see text).