Table 2. Differentially expressed and spliced transcripts.
Long slender/short stumpy | Short stumpy/procyclic | Long slender/procyclic | Total1 | |
Significantly regulated genes | 1226 | 2675 | 3296 | 3554, (3215)4 |
Upregulated2 | 769 | 1248 | 1286 | |
Downregulated3 | 457 | 1427 | 2010 | |
Differentially spliced | 158 | 415 | 458 | 676 |
Alternatively spliced | 1523 | 1531 | 1267 | 2637 |
Alternatively spliced ≥5 tags | 874 | 783 | 872 | 1588 |
total number of regulated/spliced transcripts, non-redundant.
upregulated in long slender when compared with short stumpy, short stumpy vs procyclics and long slender vs procyclics.
downregulated in long slender versus short stumpy, short stumpy versus procyclics and long slender vs procyclics.
significantly regulated ([28]; threshold of P<10−5) and ≥2× change.