TABLE 2.
Innate Immune Signaling Pathway Genes
| Gene | Probe # | Gene | Probe # | Gene | Probe # | Gene | Probe # |
|---|---|---|---|---|---|---|---|
| TLR1 | 1 | TRIF | 1 | IRF3 | 1 | MKK6 | 2 |
| TLR2 | 1 | MYD88 | 1 | IRF7 | 1 | MKK7 | 4 |
| TLR3 | 1 | MD-2 | 1 | RIP1 | 2 | MEKK1 | 2 |
| TLR4 | 4 | CD14 | 1 | RIP3 | 1 | p38 | 4 |
| TLR5 | 1 | TIRAP | 4 | A20 | 2 | TAK1 | 3 |
| TLR6 | 1 | TRAF3 | 2 | PI3K | 4 | JNK | 5 |
| TLR7 | 2 | TRAF6 | 1 | IKBα | 1 | FADD | 1 |
| TLR8 | 2 | TOLLIP | 3 | IKKβ | 3 | CASP8 | 3 |
| TLR9 | 1 | MAVS | 4 | IKKγ | 2 | TAB1 | 2 |
| TLR10 | 2 | ECSIT | 1 | IKKα | 1 | TAB2 | 2 |
| IRAK-1 | 2 | UEV1A | 2 | IKKP) (A) | 2 | ST2L | 1 |
| IRAK-2 | 2 | UBC13 | 3 | NFKB1 | 1 | SIGIRR | 2 |
| IRAK-M | 3 | SOCS1 | 3 | RelA | 2 | TWIST1 | 1 |
| IRAK-4 | 1 | SOCS3 | 4 | MKK3 | 3 | NOD2 | 1 |
| TRAM | 2 | TBK1 | 2 | MKK4 | 2 |
This table represents the 59 innate immune genes (120 probe sets) present on the Affymetrix HG-U133 plus 2.0 oligonucleotide microarray (54,675 probe sets) platform.