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. 2003 Dec 15;31(24):7150–7158. doi: 10.1093/nar/gkg926

Table 5. Tm-values and thermodynamic data of non self-complementary ps duplexes of the sequence 5′-d(ATiCiCAXTTATXA)·5′-d(TAGGTYAATACT)a,b.

X·Y   Tm (°C) ΔTm/mod (°C) X·Y   Tm (°C) ΔTm/mod (°C) X·Y   Tm (°C) ΔTm/mod (°C)
iG·Cc 28·29 39                  
4·C 30·29 39 ±0 5·C 35·29 43 +4 6·C 36·29 44 +5
4·G 30·31 >–20 5·G 35·31 >–20 6·G 36·31 >–20
4·T 30·32 27 –12 5·T 35·32 29 –10 6·T 36·32 31 –7
4·A 30·33 28 –11 5·A 35·33 28 –11 6·A 36·33 28 –11
4·iC 30·34 26 –13 5·iC 35·34 35 –4 6·iC 36·34 36 –3

aIn 1 M NaCl, 0.1 M MgCl2, 60 mM sodium cacodylate, pH 7; oligonucleotide concentration: 5 µM (single strand).

bd(iC) = MeiCd = 5-Methyl-2′-deoxyisocytidine.

cSee Seela and Wei (22).