TABLE 1.
Primer | Nucleotide sequence (5′-3′) | Purposea |
---|---|---|
oxc-L | GCTACCACGAACTGCTTCCC | PCR |
oxc-R | CCCATAACGCCCCAAGTACC | PCR |
EMBL3-F | TTATGCCCGAGAAGATGTTGA | Sequencing |
EMBL3-R | TATACATGGTTCTCTCCAGAG | Sequencing |
A | TCGCTTTCGCGCACCTGTATT | Primer walking |
B | TCGCGAACTGCGCATTCCGT | Primer walking |
C | TCATGCGCGCAATCACCGATT | Primer walking |
D | TGGGTGGTTGTCGGTGGTCT | Primer walking |
E | ATGAGCGTCTCGGCGAGGTA | Primer walking |
F | GGTCACTGATTTCGCACGTAT | Primer walking and RT-qPCR |
G | TCGGTCTTCTCGACGAATTCA | Primer walking and RT-qPCR |
H | ACCGCGAACCCCTACCTCAA | Primer walking |
I | AAGCGGCCGTATGCGCGTTGAT | Primer walking and RT-qPCR |
J | GAGATGATGATGCCGGAGAATGC | Primer walking and RT-qPCR |
K | CGCCTGCGTAATTTGGGACA | Primer walking |
L | TACGCAGCGACAGGCACCAT | Primer walking |
M | ACCAGCTCGATCGGGGATAT | Primer walking |
N | CGACTTGCACTCGTTGACGAT | Primer walking |
O | CGACGATCATGAGCTACACCAA | Primer walking |
P | GAAGCTCGGCGAGAACAA | Primer walking |
Q | ATCGGTCTCCCAGCCCTT | Primer walking and RT-qPCR |
R | CGTGTACCAGTCCATGCAGAA | Primer walking and RT-qPCR |
S | GGCCAACAAGATACGGGAAA | Primer walking |
T | GTGTGGACGGTGACGTAGATT | Primer walking |
Bif164b | GGGTGGTAATGCCGGATG | RT-qPCR |
Bif662b | CCACCGTTACACCGGGAA | RT-qPCR |
GAPDH-L | CTCGAGTGCACCGGCTTCTA | RT-qPCR |
GAPDH-R | TGAAGCCGTACTCGTTGTCGTA | RT-qPCR |
gmk-L | TGGGTTTCGGTCTCCGCCAC | RT-qPCR |
gmk-R | AGCTCCACCTTCGCGGTCTC | RT-qPCR |
recA-L | ACGGCCATCTTCATCAACCAG | RT-qPCR |
recA-R | GGTGAACCAAGAACCGGACTT | RT-qPCR |
rpoB-Lc | CCAGGTCGGCGAGCTGAT | RT-qPCR |
rpoB-Rc | TACGGGGTCTCGATGAAGC | RT-qPCR |