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. 2010 Jul 2;76(16):5609–5620. doi: 10.1128/AEM.00844-10

TABLE 1.

Oligonucleotides used in this study

Primer Nucleotide sequence (5′-3′) Purposea
oxc-L GCTACCACGAACTGCTTCCC PCR
oxc-R CCCATAACGCCCCAAGTACC PCR
EMBL3-F TTATGCCCGAGAAGATGTTGA Sequencing
EMBL3-R TATACATGGTTCTCTCCAGAG Sequencing
A TCGCTTTCGCGCACCTGTATT Primer walking
B TCGCGAACTGCGCATTCCGT Primer walking
C TCATGCGCGCAATCACCGATT Primer walking
D TGGGTGGTTGTCGGTGGTCT Primer walking
E ATGAGCGTCTCGGCGAGGTA Primer walking
F GGTCACTGATTTCGCACGTAT Primer walking and RT-qPCR
G TCGGTCTTCTCGACGAATTCA Primer walking and RT-qPCR
H ACCGCGAACCCCTACCTCAA Primer walking
I AAGCGGCCGTATGCGCGTTGAT Primer walking and RT-qPCR
J GAGATGATGATGCCGGAGAATGC Primer walking and RT-qPCR
K CGCCTGCGTAATTTGGGACA Primer walking
L TACGCAGCGACAGGCACCAT Primer walking
M ACCAGCTCGATCGGGGATAT Primer walking
N CGACTTGCACTCGTTGACGAT Primer walking
O CGACGATCATGAGCTACACCAA Primer walking
P GAAGCTCGGCGAGAACAA Primer walking
Q ATCGGTCTCCCAGCCCTT Primer walking and RT-qPCR
R CGTGTACCAGTCCATGCAGAA Primer walking and RT-qPCR
S GGCCAACAAGATACGGGAAA Primer walking
T GTGTGGACGGTGACGTAGATT Primer walking
Bif164b GGGTGGTAATGCCGGATG RT-qPCR
Bif662b CCACCGTTACACCGGGAA RT-qPCR
GAPDH-L CTCGAGTGCACCGGCTTCTA RT-qPCR
GAPDH-R TGAAGCCGTACTCGTTGTCGTA RT-qPCR
gmk-L TGGGTTTCGGTCTCCGCCAC RT-qPCR
gmk-R AGCTCCACCTTCGCGGTCTC RT-qPCR
recA-L ACGGCCATCTTCATCAACCAG RT-qPCR
recA-R GGTGAACCAAGAACCGGACTT RT-qPCR
rpoB-Lc CCAGGTCGGCGAGCTGAT RT-qPCR
rpoB-Rc TACGGGGTCTCGATGAAGC RT-qPCR
a

RT-qPCR, quantitative real-time reverse transcription-PCR.

b

Langengijk et al. (33).

c

Vitali et al. (57).