Table 1.
Differentially expressed striped sea bream hepatic unique clones after exposure to cadmium
| Accession no. | Gene annotation | Resembled species | Number of clones | Averaged M-values ± SD of differentially expressed unique clones | ||||
|---|---|---|---|---|---|---|---|---|
| Visualized clones of (meanA > 9) | Differentially expressed clones | |||||||
| FI | F | I | F | I | ||||
| Mitochondrial respiratory chain | ||||||||
| DQ850610 | Mitochondrial cytochrome b | Lithognathus mormyrus | 1 | 0 | 1 | 0 | −0.97* | |
| DQ849967 | Mitochondrial cytochrome c oxidase subunit III | Satyrichthys amiscus | 4 | 2 | 2 | 2 | −0.65 ± 0.11* | −0.88 ± 0.1* |
| Proteases | ||||||||
| DQ850573 | Elastase 4-like protein | Sparus aurata | 21 | 0 | 0 | 16 | −1.52 ± 0.31* | |
| DQ850591 | Carboxypeptidase B | Paralichthys olivaceus | 3 | 2 | 2 | 3 | −1.47 ± 0.34* | −2.09 ± 0.4* |
| DQ849726 | Trypsinogen-like protein | Sparus aurata | 19 | 0 | 0 | 9 | −1.76 ± 0.25* | |
| Protease inhibitors | ||||||||
| DQ851090 | Kininogen | Anarhichas minor | 1 | 0 | 1 | 0 | −0.86 | |
| DQ850843 | Heparin cofactor II | Brachidanio rerio | 4 | 1 | 1 | 2 | 1.05 | 0.71 ± 0.07 |
| Immune system | ||||||||
| DQ849772 | X- CO3_ONCMY and complement C31 | Paralichthys olivaceus | 1 | 0 | 0 | 1 | −1.14* | |
| DQ850497 | Perforin | Fundulus heteroclitus | 1 | 0 | 0 | 1 | −1.11 | |
| DQ849947 | OMY519930 C1R/C1S subunit of Ca2+-dependent complex | Oncorhynchus mykiss | 1 | 0 | 0 | 1 | 0.59 | |
| Oxidases | ||||||||
| DQ849874 | Cytochrome P450 (CYP2K5) | Oncorhynchus mykiss | 1 | 0 | 0 | 1 | −1.3 | |
| DQ849703 | Ceruloplasmin | Pseudopleuronectes americanus | 2 | 0 | 1 | 1 | 0.84* | 0.81* |
| DQ850163 | Glutathione peroxidase | Oplegnathus fasciatus | 1 | 0 | 0 | 1 | 0.66 | |
| Other enzymes | ||||||||
| DQ850208 | Carboxyl ester lipase | Brachidanio rerio | 2 | 0 | 0 | 1 | −1.51 | |
| Ribosomal proteins | ||||||||
| DQ849880 | Sop-prov protein | Xenopus laevis | 1 | 0 | 0 | 1 | −1.16 | |
| Metal-related proteins | ||||||||
| DQ850666 | Metallothionein | Lithognathus mormyrus | 3 | 1 | 1 | 3 | 1.26* | 2.04 ± 0.48* |
| DQ850735 | Putative transferrin | Acanthopagrus schlegelii | 9 | 2 | 2 | 4 | −0.64 ± 0.06 | −0.92 ± 0.18 |
| Other proteins | ||||||||
| DQ850849 | Vitellogenin | Pagrus major | 1 | 0 | 0 | 1 | 0.71 | |
| DQ850712 | Gastrula specific embryonic protein 1 | Epinephelus coioides | 48 | 3 | 3 | 8 | −0.51 ± 0.06 | −0.64 ± 0.08 |
| Unknowns | ||||||||
| DQ849656 | (Q5BXC0) Hypothetical protein | Schistosoma japonicum | 8 | 1 | 1 | 4 | −0.85 | −0.86 ± 0.31 |
| DQ849739 | CNS0FK72 full-length cDNA | Tetraodon nigroviridis | 8 | 0 | 1 | 1 | −0.64 | −0.58 |
| DQ850009 | 6 | 0 | 0 | 3 | 0.83 ± 0.3 | |||
| DQ850829 | 3 | 0 | 0 | 1 | −0.77 | |||
| DQ849818 | CNS0G66Q full-length cDNA | Tetraodon nigroviridis | 1 | 1 | 1 | 1 | −0.48 | −0.81 |
| DQ850314 | 1 | 0 | 0 | 1 | −1.42 | |||
| DQ850888 | 1 | 0 | 0 | 1 | 0.95 | |||
| DQ850970 | 1 | 0 | 0 | 1 | −0.48 | |||
| DQ851001 | 1 | 0 | 0 | 1 | −1.29 | |||
| DQ850538 | 1 | 0 | 0 | 1 | −1.72 | |||
| DQ849829 | 1 | 0 | 0 | 1 | −1.05 | |||
| DQ850030 | 1 | 0 | 0 | 1 | −1.39 | |||
Each unique clone is characterized by its accession number, short description of the most resembled sequence and GO annotations, number of clones of meanA > 9, significantly differentially expressed clones, and their average M-values. F, Cadmium fed; I, cadmium injected; FI, both treatments.
*Denotes correspondence with the results of Reynders et al. (2006).