TABLE 2.
Pairwise comparison of CC80:ST80-IV isolates for the number of 7775 queried loci and the 3514 open reading frames (total loci minus intergenic sequences; shown in parentheses) that were present in one isolate but absent from another
| Loci present |
||||||
|---|---|---|---|---|---|---|
| Loci absent | 1199 | 1200 | 1202 | 1201 | 1198 | 1209 |
| 1199 | 0 (0) | 55 (0) | 63 (16) | 99 (3) | 145 (47) | 142 (46) |
| 1200 | 18 (0) | 0 (0) | 44 (17) | 80 (3) | 125 (47) | 130 (44) |
| 1202 | 65 (11) | 79 (11) | 0 (0) | 79 (3) | 145 (59) | 146 (58) |
| 1201 | 275 (22) | 337 (22) | 275 (23) | 0 (0) | 206 (64) | 211 (63) |
| 1198 | 366 (17) | 449 (17) | 383 (28) | 239 (10) | 0 (0) | 175 (7) |
| 1209 | 364 (18) | 425 (19) | 364 (38) | 204 (10) | 151 (8) | 0 (0) |