Table 2.
Mating system partition 1 | Mating system partition 2 | Mating system partition 3 | Group size | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Class | Gene | UM1 | MM2 | UM1 | MM2 | UM1 | UM1 | SG3 | LG4 | ||||||||
mean5 | var6 | mean5 | var6 | mean5 | var6 | mean5 | var6 | mean5 | var6 | mean5 | var6 | mean5 | var6 | mean5 | var6 | ||
Non– | ANG | 1.39 | 1.09 | 0.97 | 0.63 | 1.50 | 1.28 | 0.96 | 0.50 | 1.50 | 1.28 | 0.97 | 0.63 | 0.68 | 0.04 | 1.36 | 1.10* |
pathogen- | CCR5 | 0.38 | 0.19 | 0.21 | 0.04 | 0.37 | 0.19 | 0.25 | 0.06 | 0.37 | 0.19 | 0.21 | 0.04 | 0.29 | 0.23 | 0.36 | 0.16 |
interacting | CD4 | 0.71 | 0.32 | 0.72 | 0.11 | 0.48 | 0.17 | 0.80 | 0.15 | 0.48 | 0.17 | 0.72 | 0.11 | 0.70 | 0.00 | 0.78 | 0.19# |
genes | CD45 | 2.69 | 3.48 | 5.71# | 11.86 | 2.69 | 3.48 | 5.71# | 11.86 | 2.69 | 3.48 | 5.71# | 11.86 | 4.55 | 8.23 | 3.27 | - |
DUFFY | 0.56 | 0.09 | 0.39 | 0.06 | 0.57 | 0.10 | 0.40 | 0.06 | 0.57 | 0.10 | 0.39 | 0.06 | 0.34 | 0.01 | 0.45 | 0.07* | |
Pathogen- | APOBEC3G | 1.35 | 1.95 | 1.59 | 0.35 | 0.88 | 0.84 | 1.83# | 1.07 | 0.88 | 0.84 | 1.59 # | 0.35 | 0.87 | 0.21 | 2.04* | 1.28# |
interacting | APOBEC3H | 0.97 | 0.09 | 1.11 | 0.52# | 0.86 | 0.07 | 1.13 | 0.46 | 0.86 | 0.07 | 1.11 | 0.52 | 1.24 | 0.41 | 0.90 | 0.51 |
genes | CAMP | 1.47 | 2.21 | 0.88 | 0.29 | 1.88 | 2.54 | 0.73 | 0.20 | 1.88 | 2.54 | 0.88 | 0.29 | 0.93 | 0.41 | 0.65 | 0.16 |
PKR | 0.79 | 0.51 | 1.42# | 1.14 | 0.95 | 0.54 | 1.18 | 1.15 | 0.95 | 0.54 | 1.42 | 1.14 | 0.90 | 0.19 | 1.33 | 1.33* | |
TLR1 | 0.50 | 0.04 | 0.65 | 0.20* | 0.57 | 0.06 | 0.55 | 0.11 | 0.57 | 0.06 | 0.65 | 0.20 | 0.43 | 0.02 | 0.65 | 0.30* | |
TLR4 | 0.64 | 0.43 | 1.18# | 1.17# | 0.54 | 0.45 | 1.14# | 0.99 | 0.54 | 0.45 | 1.11 | 1.08 | 1.27 | 1.74 | 0.69 | 0.23 | |
TLR5 | 0.43 | 0.02 | 0.74 | 0.65* | 0.44 | 0.02 | 0.67 | 0.53* | 0.44 | 0.02 | 0.74 | 0.65* | 0.35 | 0.02 | 0.49 | 0.08# | |
TRIM5 | 1.28 | 0.88 | 1.22 | 0.26 | 1.38 | 1.21 | 1.17 | 0.23 | 1.38 | 1.21 | 1.22 | 0.26 | 1.56 | 0.84 | 0.95 | 0.26 | |
TRIM22 | 0.36 | 0.06 | 0.52 | 0.29 | 0.34 | 0.07 | 0.47 | 0.20 | 0.34 | 0.07 | 0.52 | 0.29 | 0.35 | 0.02 | 0.50 | 0.30* | |
ZAP | 0.61 | 0.08 | 0.76 | 0.26 | 0.76 | 0.07 | 0.62 | 0.19 | 0.76 | 0.07 | 0.76 | 0.26 | 0.82 | 0.31 | 0.55 | 0.09 |
P<0.05.
P<0.1.
Shaded cells indicate cases in which the mean or variance in dN/dS are higher in MM or LG species.
Unimale species.
Multimale species.
Small group size.
Large group size.
t-test between average dN/dS of MM branches and average dN/dS of UM branches (1 tail test).
z-test of differences in variance of dN/dS between MM and UM branches (1 tail test).