Table I.
Data collection and refinement statistics | Sec13–Sec16 | Sec13–Sec16 | Sec13–Sec31ΔL |
Data collection | |||
Data set | Native | Selenomethionine | Native |
Space group | P212121 | P21 | P21 |
Cell dimensions | |||
a, b, c (Å) | 56.7, 139.0, 205.4 | 56.0, 144.1, 204.3 | 156.2, 46.6, 192.0 |
α, β, γ (°) | 90, 90, 90 | 90, 90, 90 | 90, 93.5, 90 |
Wavelength (Å) | 0.9792 | 0.9792 | 0.9792 |
Resolution range (Å) | 30.0–2.65 (2.74–2.65) | 30.0–2.70 (2.80–2.70) | 30.0–2.80 (2.87–2.80) |
Total reflections | 168736 | 430502 | 396307 |
Unique reflections | 45333 | 88825 | 69366 |
Completeness (%) | 99.8 (99.4) | 99.9 (100) | 99.6 (99.4) |
Redundancy | 3.7 (3.5) | 3.6 (3.7) | 5.7 (5.5) |
Rmerge (%) | 7.4 (65.3) | 8.1 (56.0) | 16.4 (47.7) |
Rr.i.m. (%) | 8.6 (80.1) | 9.9 (78.7) | 18.1 (50.0) |
Rp.i.m. (%) | 4.4 (42.0) | 4.5 (35.8) | 7.3 (20.8) |
I/σ | 20.7 (1.9) | 25.5 (2.7) | 9.6 (3.3) |
Wilson B factor (Å2) | 51.6 | 49.6 | 55.7 |
Refinement | |||
Resolution range (Å) | 30.0–2.69 | 30.0–2.80 | |
Rwork | 19.8 | 26.7 | |
Rfree | 24.3 | 30.0 | |
Twin law | −h, −k, l | ||
Twin fraction | 0.23 | ||
Number of reflections | |||
Total | 44,752 | 69,353 | |
Rfree | 2,158 | 1,792 | |
Number of atoms | |||
Protein | 10,476 | 19,197 | |
Water | 184 | 0 | |
B factors (Å2) | |||
Protein | 103.0 | 51.8 | |
Sec13 (chain A) | 45.8 | ||
Sec16 (chain B) | 74.3 | ||
Sec16 (chain C) | 111.0 | ||
Sec13 (chain D) | 191.0 | ||
Water | 52.0 | ||
R.m.s deviations | |||
Bond lengths (Å) | 0.005 | 0.006 | |
Bond angles (°) | 0.836 | 0.936 | |
Ramachandran plot | |||
Favored (%) | 95.5 | 94.4 | |
Allowed (%) | 4.3 | 5.1 | |
Outliers (%) | 0.2 | 0.5 |
The highest resolution shell is shown in parentheses. Rmerge is the merging R factor. Rr.i.m. is the redundancy independent merging R factor. Rp.i.m. is the precision-indicating merging R factor. For definitions, see Weiss (2001).