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. 2010 May 20;27(7):397–407. doi: 10.1007/s10815-010-9432-5

Table 2.

Preimplantation PKHD1 haplotyping by PCR using STR markers and capillary electrophoretic detection

STR Genotypes of Patient Family
STR: 5–326 k 5–85 k 28 k 329 k 3–104 k 3–85 k 3–263 k 3–204.2 k
Type: Di Tetra Tetra Di Tetra Di Tetra Tri
Father: 272, 307 361, 361 193, 185 211, 192 278, 278 235, 231 406, 423 175, 198
Fetuses: 272, 288 361, 368 193, 193 211, 203 278, 278 235, 235 406, 406 175, 175
Mother: 288, 307 368, 361 193, 193 203, 192 278, 315 235, 225 406, 414 175, 186
PGD infant: 272, 307 361, 361 193, 193 211, 192 278, 315 235, 225 406, 414 175, 186
 
STR Genotypes of Blastomeres
STR: 5–326 k 5–85 k 28 k 329 k 3–104 k 3–85 k 3–263 k 3–204.2 k
Type: Di Tetra Tetra Di Tetra Di Tetra Tri
Embryos Cells Predicted Haplotype
E1 −1 ADO, 288 361, ADO 193, 193 211, 203 278, 278 235, 235 406, 406 175, 175 mut
E2 −1 272, 307 361, ADO 193, 193 211, 192 278, 315 238*, 225 406, 414 [173]*, 186 het
E3 −1 272, 288 361, 368 193, 193 211, 203 278, 278 235, 235 406, 406 FA mut
E4 −1 Cell lysed after biopsy
−2 307, 307 361, 361 185, 193 193, 193 ADO, 315 231, 225 423, 414 ADO, 186 wt
E5 −1 FA 360, ADO 193, 193 211, 203 278, 278 235, 235 406, 406 175, 175 mut
E6 −1 307, 307 361, 361 185, [193] 192, 192 278, 315 231, 225 [423], 414 198, 186 wt
−2 307, 307 361, 361 [185], 193 192, 192 278, 315 231, 225 423, [414] [198], 186 wt
E7 −1 FA 360, -- 185, 193 198*, -- 282*, -- 233*, 225 415, -- FA Indeterminate; Morphologically poorly developed

*: Anomalous mobility

[ ]: Weak signal due to preferential amplification

-- : The expected allele was not detected

E1–E7 Embryos #1–7, STR Short tandem repeat, ADO Allele drop-out, FA Amplification failure

Remark: Paternally derived markers in each cell are shown on the left and maternally derived markers on the right (not applicable to father and mother).

Test results are reported as follows:

wt Wildtype, mut Homozygous mutation, het Heterozygous mutation (or a carrier)