Table 1.
Work time, value of RNA concentration, purity and cycle threshold (Ct) resulting from Real-Time PCR. HPRT data are reported as endogenous Ct, GREM1 data are reported as target Ct since it was the gene expressed at the lower level
Extraction method | Work time | Total RNA (ng) | Abs 260/280 | Abs 206/230 | Total RNA (ng/μl) | Endogenous Ct | Target Ct |
---|---|---|---|---|---|---|---|
A | 60 min | 4,153 ± 1,025 | 1.24 ± 0.03 | 0.37 ± 0.02 | 207.65 ± 51.25 | 23.39 ± 2.05 | 28.44 ± 3.29 |
B | 15 min | 1283 ± 641 | 0.40 ± 0.08 | 0.06 ± 0.06 | 25.66 ± 12.82 | 35.86 ± 2.89 | 36.04 ± 3.27 |
C | 30 min | 124 ± 48 | 0.92 ± 0.05 | 0.11 ± 0.03 | 4.97 ± 1.92 | 22.43 ± 2.17 | 28.11 ± 3.17 |
D | 30 min | 103 ± 38 | 1.28 ± 0.03 | 0.08 ± 0.02 | 7.36 ± 2.72 | 20.94 ± 2.12 | 26.44 ± 3.16 |
E | 30 min | 61 ± 21 | 0.96 ± 0.04 | 0.07 ± 0.04 | 2.42 ± 0.84 | 27.73 ± 2.81 | 34.59 ± 3.77 |
Data are reported as mean±DS