Table 3.
Dataset | Phosphopeptides |
Phosphosites |
||
---|---|---|---|---|
Pass | Fail | Pass | Fail | |
Orbitrap | 1617 | 1992 | 557 | 252 |
Q-Star | 2101 | 2521 | 939 | 456 |
Automated assignment to the dataset by the methodology described. A single verified site observation at any peptide rank which met the appropriate quality criteria was considered sufficient to call as a phosphosite.