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. Author manuscript; available in PMC: 2011 Sep 30.
Published in final edited form as: Virology. 2010 Jul 3;405(2):289–299. doi: 10.1016/j.virol.2010.05.019

TABLE 1.

Oligo Name Direction Sequence 5’→ 3’
18a5’ 5’ GCTAGCAGATCTATGGTATCCCACCGTGCCGC
18L2gHin 3’ GCTAGCAAGCTTCTAGGCCGCCACAAAGCC
18L1hHin 5’ GCTAGAAAGCTTATGTGCCTGTATACACGG
18L1hBgl 3’ GCTAGCAGATCTTTACTTTCCTGGCACGTAC
16c5’ 5’ GCTAGCAGATCTATGCGACACAAACGTTCTGC
16L2eHin 3’ GCTAGCAAGCTTCTAGGCAGCCAAGAA
16L1fHin 5’ GCTAGCAAGCTTTTACAGCTTACGTTTTTTGCG
16L1fBgl 3’ GCTAGCAGATCTATGCAGGTGACTTTTATTTAC
CM B1 5’ GCTAGCGCTCTTCATGACAACCCGGCCTTTGAGCCTGTG
CM B2 3’ GCTAGCAAGCTTCTAGGCCGCCACAAAGCC
CM B3 5’ GCTAGCAGATCTATGCGACACAAACGTTCT
CM B4 3’ GCTAGCGCTCTTCATCATATGTAATAAGTTTAGTGGGAGT
CM C1 5’ GCTAGCAAGCTTATGTGCCTGTATACACGG
CM C2 3’ GCTAGCGCTCTTCCTCACGCCGTAAGCAAAAAAACATGGA
CM C3 5’ GCTAGCGCTCTTCGTGAACAAATGTTTGTTAGACATTTA
CM C4 3’ GCTAGCAGATCTTTACAGCTTACGTTTTTT
CM E1 5’ GCTAGCGCTCTTCATGATAATCCTGCATATGAAGGTATA
CM E2 3’ GCTAGCAAGCTTCTAGGCAGCCAAAGAGAC
CM E3 5’ GCTAGCAGATCTATGGTATCCCACCGTGCC
CM E4 3’ GCTAGCGCTCTTCGTCATATGTAATTAAAGAGGATGGACG
CM F1 5’ GCTAGCAAGCTTATGCAGGTGACTTTTATT
CM F2 3’ GCTAGCGCTCTTCCCTTCGTAAATAAAAAAATAAGCT
CM F3 5’ GCTAGCGCTCTTCGAAGGCAGCTTTTTGCTAGGCATTTT
CM F4 3’ GCTAGCAGATCTTTACTTCCTGGCACGTAC
CM N-35 5’ GCTAGCAAGCTTATGGTACACATTATTATTTGTGGC