. Author manuscript; available in PMC: 2011 Mar 5.

Published in final edited form as: Am J Med Genet B Neuropsychiatr Genet. 2010 Mar 5;153B(2):656–662. doi: 10.1002/ajmg.b.31035

Table 2.

FDR q-values for LOD scores ≥ 1, ≥ 2 and ≥ 3, accounting for multiple testing in primary analyses.

LOD	Observed scores	Expected scores^*	FDR q-value^**
≥ 3	3	0.23	0.08
≥ 2	7	2.17	0.31
≥ 1	9	2.97	0.33

Expected indicates the number of markers expected to exceed the LOD score under the null distribution;

^**

corresponding FDR q-value indicating the proportion of the findings exceeding the LOD score that would be expected under the null (i.e. expected/observed).