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. Author manuscript; available in PMC: 2011 Sep 1.
Published in final edited form as: Arch Microbiol. 2010 Jun 18;192(9):715–728. doi: 10.1007/s00203-010-0599-z

Table 2.

Combinations of conditions used for this study

# Temperature (°C) Medium Dilution Time
27 29.5 32 34.5 37 TB LB TSB 1:100 1:30 1:20 1:10 24 48
1 0 0 0 0 1 0 1 0 0 0 0 1 1 0
2 0 0 0 0 1 1 0 0 1 0 0 0 1 0
3 1 0 0 0 0 0 0 1 0 0 0 1 1 0
4 0 0 0 0 1 0 1 0 0 0 1 0 0 1
5 1 0 0 0 0 0 0 1 0 0 1 0 0 1
6 0 0 0 0 1 1 0 0 1 0 0 0 0 1
7 0 0 0 0 1 0 0 1 0 0 0 1 0 1
8 0 0 0 0 1 0 0 1 0 0 1 0 1 0
9 0 0 0 0 1 1 0 0 0 0 0 1 0 1
10 0 0 1 0 0 0 1 0 0 1 0 0 0 1
11 1 0 0 0 0 0 1 0 0 0 1 0 1 0
12 0 0 1 0 0 0 1 0 1 0 0 0 1 0
13 0 1 0 0 0 1 0 0 0 1 0 0 1 0
14 0 1 0 0 0 1 0 0 0 0 1 0 0 1
15 0 0 1 0 0 1 0 0 0 0 0 1 1 0
16 0 0 1 0 0 1 0 0 1 0 0 0 0 1
17 1 0 0 0 0 0 0 1 1 0 0 0 1 0
18 1 0 0 0 0 0 1 0 1 0 0 0 0 1
19 1 0 0 0 0 1 0 0 0 0 0 1 0 1
20 0 0 0 1 0 1 0 0 0 0 1 0 1 0
21 0 0 1 0 0 0 0 1 0 1 0 0 1 0
22 1 0 0 0 0 0 1 0 0 0 0 1 0 1
23 0 0 1 0 0 0 1 0 1 0 0 0 1 0
24 0 0 0 0 1 0 0 1 1 0 0 0 0 1
25 0 0 0 0 1 0 0 1 1 0 0 0 1 0

Each combination of environmental conditions is characterized by one temperature, one growth medium, one dilution from the overnight culture, and one incubation time. The D-Optimal response surface design algorithm was used to select combinations 1 through 22. Combinations 23 to 25 were added after it was observed that temperature and nutrition were the most important environmental factors. # is the running number for the combinations of environmental conditions. These are designated ‘attributes’ for the VIP2 algorithm (GO analysis). Running numbers in this Table are identical to Figs. 2C and D.