Table III. Predicted targets of selected miRNAs.

Tissue of expression in the last column is as follows: S, stem; L, leaf; F, flower; P, young pods; R, roots; 6, 6 dpi of B. japonicum; 14, 14 dpi of B. japonicum. Tissues in which expression was detected are marked by an x. Gene annotations were based on Phytozome Soybean Genome version 5.0. Gene names in boldface indicate expression in roots during nodulation.

miRNA Family	Predicted Target (Glyma1 Gene Name)	Annotation	Expression during Nodulation
			S	L	F	P	R	6	14
miR482	Glyma12g28730.1	GSK-3-like protein MsK4	x	x	x		x	x	x
	Glyma17g04060.1	Unknown protein	x	x	x	x	x		x
	Glyma01g31520.1	TIR disease-resistant protein		x			x
miR1507	Glyma03g29370	Unknown protein	x	x	x			x	x
	Glyma04g01550	Sorbitol-like transporter	x	x		x	x	x	x
	Glyma08g04230	Dynein light chain type 1 family protein		x		x	x	x	x
	Glyma15g21140	Disease resistance protein		x		x
miR1511	Glyma18g43950.1	Protein phosphatase 2C, putative
	Glyma06g02710.1	Unknown protein	x	x	x		x	x	x
	Glyma09g41720.1	Protein phosphatase 2C, putative					x	x	x
	Glyma06g42720	Unknown protein
	Glyma09g16310	Epoxide hydrolase
	Glyma12g19490	Putative gag-pol polyprotein-related				x	x	x	x
	Glyma17g24430	α-Carboxyltransferase precursor
	Glyma18g48190	Unknown protein
miR1512	Glyma08g17790	Ser/Thr protein kinase		x		x	x	x	x
	Glyma06g05910	Calmodulin-binding region myosin head				x
	Glyma04g05920	Calmodulin-binding region					x	x
miR1515	Glyma09g27690	β-Glucosidase, putative	x	x	x		x	x	x
	Glyma09g02920	Putative Dicer-like protein				x	x	x
miR1521	Glyma08g12340	Peptidase C1A, papain		x			x	x	x
	Glyma03g39500.1	ATPase; 26S proteasome subunit P45	x	x	x	x	x	x	x