Table 3.

Top ten up-regulated genes identified at each time point after ONX compared to SHAM.

	Probe ID	Gene name	Fold change
6 hours	Dr.19525.2.A1	Quinoid dihydropteridine reductase a	16.1
	Dr.17738.2.A1	tumor necrosis factor, alpha-induced protein 6	15.9
	Dr.15281.1.A1	tissue inhibitor of metalloproteinase 2, like	11.3
	Dr.10314.1.S1	matrix metalloproteinase 13	9.1
	Dr.12986.1.A1	v-fos FBJ murine osteosarcoma viral oncogene homolog	5.9
	Dr.20198.1.S1	heat shock cognate 70-kd protein	5.8
	Dr.14282.1.S1	activating transcription factor 3	4.7
	Dr.967.1.S1	matrix metalloproteinase 9	4.1
	Dr Affx.2.25.A1	granulin 1	4.0
	Dr.314.1.S1	achaete-scute complex-like 1a	4.0
1 day	Dr.17738.2.A1	tumor necrosis factor, alpha-induced protein 6	63.2
	Dr.17618.1.A1	kininogen 1	10.9
	Dr.15281.1.A1	tissue inhibitor of metalloproteinase 2, like	10.2
	Dr.25168.1.S1	asparagine synthetase	10.0
	Dr.14282.1.S1	activating transcription factor 3	8.6
	Dr Affx.2.25.A1	granulin 1	8.5
	Dr.5094.3.A1	Smu-1 suppressor of mec-8 and unc-52 homolog	8.3
	Dr.92.1.A1	growth associated protein 43	7.4
	Dr.12986.2.S1	v-fos FBJ murine osteosarcoma viral oncogene homolog	5.9
	Dr.19525.2.A1	Quinoid dihydropteridine reductase a	5.7
4 days	Dr.4412.3.A1	spectrin alpha 2	1638.3
	Dr.19902.2.A1	cathepsin	1088.0
	Dr.2596.2.A1	MpV17 transgene, murine homolog, glomerulosclerosis	999.7
	Dr.12259.1.S1	B-cell translocation gene 4	849.7
	Dr.5719.1.A1	claudin d	828.0
	Dr.728.1.S1	pseudouridylate synthase 1	560.9
	Dr.4412.2.S1	dentin sialophosphoprotein preproprotein	477.4
	Dr.20877.1.S1	importin alpha	464.6
	Dr.4039.3.S1	crystallin, zeta (quinone reductase)	464.3
	Dr.24219.4.S1	cellular nucleic acid-binding protein	410.0
12 days	Dr.268.1.S1	ependymin	35.3
	Dr.4412.3.A1	spectrin alpha 2	9.8
	Dr.7753.1.S1	parvalbumin 5	8.9
	Dr.22670.1.A1	calpain 8	7.3
	Dr.12665.1.S1	G protein-coupled receptor 172-like	6.6
	Dr.13204.1.A1	transcription factor IIIA-like	6.4
	Dr.26388.1.S1	mitotin	6.3
	Dr Affx.1.17.S1	nuclear receptor subfamily 5, group A, member 1b	6.2
	Dr.588.1.S1	forkhead box A sequence	5.7
	Dr.20821.1.A1	plasminogen	5.5
21 days	Dr.14499.1.S1	globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like	15.3
	Dr.23423.2.S1	zona pellucida glycoprotein 2.2, 2.3	8.8
	Dr.3073.1.A1	serpin peptidase inhibitor, clade A, member 7	7.9
	Dr.14434.1.S1	piwi-like 1	7.0
	Dr.20821.1.A1	plasminogen	5.5
	Dr.6031.2.A1	polymerase (DNA directed), lambda	4.7
	Dr.8107.1.S1	SRY-box containing gene 17	4.5
	Dr.8280.1.S2	decapentaplegic and Vg-related 1, RNA binding protein	4.4
	Dr.2452.2.A1	complement component 9	4.3
	Dr.19877.1.S1	V-set and transmembrane domain containing 2 like	4.2