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. 2010 Aug;185(4):1477–1487. doi: 10.1534/genetics.110.116582

TABLE 4.

Significant associations identified from 23 SNPs retested in the Flynn validation population

SNP Gene Trait Description Genotype P-value q-value R
60a pal1 Trait 81 Density c/t 0.0010 0.0435 0.039
60a pal1 Trait 71 Ring Width c/t 0.0035 0.0435 0.037
60a pal1 Trait 79 Density c/t 0.0320 0.0653 0.029
60a pal1 Trait 65 Density c/t 0.0330 0.0653 0.030
64 pcber2 Trait 65 Density g/a 0.0045 0.1798 0.035
64 pcber2 Trait 8 Density g/a 0.0155 0.1914 0.030
64 pcber2 Trait 79 Density g/a 0.0245 0.1914 0.030
64 pcber2 Trait 81 Density g/a 0.0305 0.1914 0.032
146 susy Trait 85 MFA g/t 0.0015 0.1914 0.038
146 susy Trait 40 MFA g/t 0.0300 0.1914 0.029
146 susy Trait 66 MFA g/t 0.0415 0.2188 0.028
146 susy Trait 84 MFA g/t 0.0495 0.2393 0.029

R, proportion of the additive genetic variance controlled by SNP.

a

SNP shortlisted in discovery population.