Table 1. Genetic regions showing multipoint NPL LOD ≥ 2.0.
Location | Study allele frequency | CEPH allele frequency | |||||
---|---|---|---|---|---|---|---|
Marker | cM | cyto | Mbp | LOD | p-value | LOD | p-value |
D3S240 | 219.97 | 3q29 | 195.6 | 0.58 | 0.05 | 2.61 | 0.0003 |
D4S2999* | 152.70 | 4q31.3 | 155.0 | 0.69 | 0.04 | 2.13 | 0.0009 |
D7S2459 | 120.05 | 7q22.3 | 107.1 | 1.44 | 0.005 | 2.02 | 0.0012 |
D7S525* | 121.35 | 7q31.1 | 109.4 | 1.76 | 0.002 | 2.78 | 0.0002 |
D7S2418 | 122.15 | 7q31.1 | 109.8 | 1.63 | 0.003 | 2.49 | 0.0004 |
D7S471* | 122.82 | 7q31.1 | 111.8 | 1.51 | 0.004 | 2.37 | 0.0005 |
D7S486 | 124.82 | 7q31.2 | 115.7 | 1.46 | 0.005 | 2.14 | 0.0009 |
D7S633* | 125.99 | 7q31.2 | 116.8 | 1.82 | 0.002 | 2.97 | 0.00011 |
D7S643* | 126.81 | 7q31.31 | 120.5 | 2.01 | 0.0012 | 3.08 | 0.00008 |
D7S685* | 127.87 | 7q31.32 | 121.1 | 2.00 | 0.0012 | 2.95 | 0.00011 |
D7S2529* | 128.64 | 7q31.32 | 122.2 | 1.89 | 0.002 | 2.75 | 0.0002 |
D7S2520* | 129.44 | 7q31.32 | 123.4 | 1.90 | 0.002 | 2.51 | 0.0003 |
D7S648 | 129.45 | 7q31.33 | 123.6 | 1.90 | 0.002 | 2.50 | 0.0003 |
D7S2203* | 130.56 | 7q31.33 | 125.1 | 1.99 | 0.0012 | 2.99 | 0.0001 |
D7S1873* | 131.07 | 7q31.33 | 125.9 | 1.99 | 0.0012 | 2.77 | 0.0002 |
D7S680* | 131.23 | 7q31.33 | 126.5 | 1.91 | 0.002 | 2.57 | 0.0003 |
D7S514 | 131.55 | 7q31.33 | 126.8 | 1.73 | 0.002 | 2.36 | 0.0005 |
D7S530 | 133.20 | 7q32.1 | 129.0 | 1.44 | 0.005 | 2.12 | 0.0009 |
D7S2519* | 133.67 | 7q32.2 | 129.8 | 1.42 | 0.005 | 2.20 | 0.0007 |
indicates markers used for fine mapping. The location (cM) is derived from published deCODE data and used for linkage analysis in this study 26. The cytogenetic and physical location is from UCSC Genome Browser March 2006 assembly. Bonferroni-corrected p-value for multiple comparisons for the full genome scan at D7S643 is 0.086 (0.00008*1081 markers).