Table 1.
Primers | Primers from 5' to 3' | PCR conditions denaturation annealing extension |
MAGE-1 outer primers | Forward primer: 5'-CGGCCGAAGGAACCTGACCCAG-3' | 94°C for 45 s |
Reverse primer: 5'-GCTGGAACCCTCACTGGGTTGCC-3' | 65°C for 45 s | |
72°C for 45 s | ||
MAGE-1 inner primers | Forward primer: 5'-ACAGAGGAGCACCAAGGAGAAG-3' | 94°C for 45 s |
Reverse primer: 5'-AGTTGATGGTAGTGGGAAAGGC-3' | 65°C for 45 s | |
72°C for 45 s | ||
SSX-1 outer primers | Forward primer: 5'-CTAAAGCATCAGAGAAGAGAAGC-3' | 94°C for 60 s |
Reverse primer: 5'-AGATCTCTTATTAATCTTCTCAGAAA-3' | 57°C for 60 s | |
72°C for 60 s | ||
SSX-1 inner primers | Forward primer: 5'-TCAGAGAAGAGAAGCAAGGCCTTT-3' | 94°C for 45 s |
Reverse primer: 5'-TTCTCAGAAATATTTGCTTTTCC-3' | 56°C for 45 s | |
72°C for 45 s | ||
CTp11 outer primers | Forward primer: 5'-CTGCCCCAGACATTGAAGAA-3' | 94°C for 45 s |
Reverse primer: 5'-TCCATGAATTCCTCCTCCTC-3' | 57°C for 60 s | |
72°C for 90 s | ||
CTp11 inner primers | Forward primer: 5'-TGTGAATCCAACGAGGTG-3' | 94°C for 45 s |
Reverse primer: 5'-TTGATTCTGTTCTCTCGGGC-3' | 60°C for 45 s | |
72°C for 45 s |
PCR: Polymerase chain reaction; MAGE-1: Melanoma antigen-1; SSX-1: Synovial sarcoma X breakpoint-1; CTp11: Cancer-testis-associated protein of 11 kDa.