Table 3. Genes potentially important to biofilm formation and epithelial adhesion.
409-05 (a) | 317 (b) | 594 (c) | Product | Orthology (% ID) a-b/b-c/c-a |
EPS production and Biofilm formation | ||||
HMPREF0424_0402 | HMPREF0421_20545 | 685 | Family 1 glycosyltransferase | 90/100/88 |
HMPREF0424_1181 | n/a | n/a | Family 1 glycosyltransferase | -/-/- |
HMPREF0424_0821 | HMPREF0421_20842 | 565 | Family 2 glycosyltransferase | 81/100/81 |
HMPREF0424_1138 | HMPREF0421_20434 | 184 | Family 2 glycosyltransferase | 92/100/92 |
HMPREF0424_1180 | n/a | n/a | Family 2 glycosyltransferase | -/-/- |
HMPREF0424_1189 | n/a | n/a | Family 2 glycosyltransferase | -/-/- |
n/a | HMPREF0421_20405 | 535 | Family 2 glycosyltransferase | -/100/- |
n/a | HMPREF0421_20407 | 537 | Family 2 glycosyltransferase | -/100/- |
n/a | HMPREF0421_20412 | 540 | Family 2 glycosyltransferase | -/100/- |
n/a | HMPREF0421_20413 | 541/1237 | Family 2 glycosyltransferase | -/100/- |
HMPREF0424_1083 | HMPREF0421_20944 | 262 | Family 4 glycosyltransferase | 96/100/96 |
HMPREF0424_0590 | HMPREF0421_20996 | 224 | Glycosyltransferase (unclear family) | 57/100/61 |
Fimbria/Pili biogenesis (Epithelial adhesion) | ||||
HMPREF0424_1026 | HMPREF0421_21115 | 749 | Type-I fimbrial major subunit precursor | 61/100/61 |
n/a | HMPREF0421_20500 | n/a | Type-I fimbrial major subunit precursor | -/-/- |
HMPREF0424_1164 | HMPREF0421_21204 | 1121 | Type-II fimbrial major subunit precursor | 43/100/44 |
HMPREF0424_0378 | HMPREF0421_21089 | 774 | Type IV prepillin peptidase | 52/100/52 |
HMPREF0424_0125 | n/a | n/a | TadE-like protein | -/-/- |
n/a - indicates protein was not identified within the available genome sequence.
409-05.
317.
594.