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. 2010 Aug 27;5(8):e11881. doi: 10.1371/journal.pone.0011881

Table 2. List of putative STAT1 binding motifs identified by PeakRegressor.

STAT1 Normalized coef.
CA[TC]GTGACT[TG]C 1.
[TG]G[GTA][GC][AG]TTT[CA]C[AGC][GA]GAA[AC][TG]G[GA][GC] 0.96
TTC[CT][TG][GA]GAAAT[GC][CA][CA][CAT][AT][TCG][CG][CT] 0.72
[CT][TC]CA[GT]TTCCAGGAA[AT]T[CG][CAT]C[CT] 0.65
GGAGGGCG −0.57
GGACGCCG −0.56
A[CT]TTC[TC][TG]GGAA 0.56
TT[CA]C[TAG][GA]GAA[GA]T 0.55
A[TA]TTCC[CT][GA]GAA[AC]T[CG][AC] 0.48
TT[CA][TC][GA]GGAA[AG] 0.47

The classical GAS motifs are shown in boldface.