Table 2. List of putative STAT1 binding motifs identified by PeakRegressor.
STAT1 | Normalized coef. |
CA[TC]GTGACT[TG]C | 1. |
[TG]G[GTA][GC][AG]TTT[CA]C[AGC][GA]GAA[AC][TG]G[GA][GC] | 0.96 |
TTC[CT][TG][GA]GAAAT[GC][CA][CA][CAT][AT][TCG][CG][CT] | 0.72 |
[CT][TC]CA[GT]TTCCAGGAA[AT]T[CG][CAT]C[CT] | 0.65 |
GGAGGGCG | −0.57 |
GGACGCCG | −0.56 |
A[CT]TTC[TC][TG]GGAA | 0.56 |
TT[CA]C[TAG][GA]GAA[GA]T | 0.55 |
A[TA]TTCC[CT][GA]GAA[AC]T[CG][AC] | 0.48 |
TT[CA][TC][GA]GGAA[AG] | 0.47 |
The classical GAS motifs are shown in boldface.