Skip to main content
. 2010 Aug 27;5(8):e11881. doi: 10.1371/journal.pone.0011881

Table 9. List of putative STAT1 binding motifs identified by principal component regression.

STAT1 Normalized coef.
[TAC]TTCC[CA][GA][GT]AA[AG][TA]C 1.0
TTTCC[CT][GA]GAAAA[CT]TC[AC]TGAA 0.94
TTTTC[CT][AG]GGAA[AG][GT]GG[CG][TCA][GA]GG 0.87
TTTC[TC][TG][GA][GAT]AA[GA] 0.86
[TC]TTCC[AC][AG]G[AC]A 0.85
[GA]GAACC[TC][TG]CAGTTC[CT][AG]GGAA 0.82
CC[CTA][CGT]TTTC[CT]T[GA]GAA[AG][ACT][CG] 0.82
TTC[CT][TG][GA]GAAAT[GC][CA][CA][CAT][AT][TCG][CG][CT] 0.81
TTTC[CT][AGT]GGAAA[TG][GA][GA]G[TAC][GA]G 0.80
G[CT]TT[CA][CT][GAT][GA]GAA[AG][TG][AGC][GA][GCA][TGA]A[CG] 0.78

The classical GAS motifs are shown in boldface.