Table 9. List of putative STAT1 binding motifs identified by principal component regression.
STAT1 | Normalized coef. |
[TAC]TTCC[CA][GA][GT]AA[AG][TA]C | 1.0 |
TTTCC[CT][GA]GAAAA[CT]TC[AC]TGAA | 0.94 |
TTTTC[CT][AG]GGAA[AG][GT]GG[CG][TCA][GA]GG | 0.87 |
TTTC[TC][TG][GA][GAT]AA[GA] | 0.86 |
[TC]TTCC[AC][AG]G[AC]A | 0.85 |
[GA]GAACC[TC][TG]CAGTTC[CT][AG]GGAA | 0.82 |
CC[CTA][CGT]TTTC[CT]T[GA]GAA[AG][ACT][CG] | 0.82 |
TTC[CT][TG][GA]GAAAT[GC][CA][CA][CAT][AT][TCG][CG][CT] | 0.81 |
TTTC[CT][AGT]GGAAA[TG][GA][GA]G[TAC][GA]G | 0.80 |
G[CT]TT[CA][CT][GAT][GA]GAA[AG][TG][AGC][GA][GCA][TGA]A[CG] | 0.78 |
The classical GAS motifs are shown in boldface.