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. 2010 Aug 30;5(8):e12476. doi: 10.1371/journal.pone.0012476

Table 1. Genes of dockerin-containing proteins in putative operons in R. flavefaciens FD-1.

Protein modulesa Dockerin group Expression fold changeb ORF
SIGN-GH9-CBM3-Doc 1a 4.49 ORF01132
SIGN-CBM4-IgX-GH9-Doc 1a 6.60 ORF01133
SIGN-GH43-UNK-CBM13-Doc 1b 0.97 ORF00226
SIGN-CBM35-GH5-Doc 1b 2.11 ORF00227
SIGN-UNK-Doc 1b 1.17 ORF00228
SIGN-UNK-Doc 4a 0.60 ORF02170
SIGN-UNK-Doc 4a 0.66 ORF02171
SIGN-UNK-Doc 4a 1.07 ORF02172
SIGN-UNK-Doc 4a 0.98 ORF02173
SIGN-Transglutaminase like-Doc 4b 4.11 ORF01263
SIGN-Transglutaminase like-Doc 4b 3.86 ORF01264
SIGN-Transglutaminase like-Doc 4b 2.98 ORF01265
SIGN-Transglutaminase like-Doc 4b 3.52 ORF01266
SIGN-LRR-Doc 4b 3.87 ORF01267
SIGN-LRR-Doc 6a 2.09 ORF01964
SIGN-UNK(LbetaH-LamGL)-Doc 6a 1.80 ORF01965
SIGN-Doc-SERPIN 6b 1.16 ORF01368
SIGN-Doc-SERPIN 6b N/A ORF01369
a

Abbreviations: sign, signal peptide; GH, glycoside hydrolase; CBM, carbohydrate-binding module; Doc, dockerin; unk, unknown; LRR, leucine-rich repeat.

b

Expression data was based on Berg Miller et al [24].