Table 2.
The values of invariants of DNA persistence lengths and helical repeats obtained from elemental set 2 extended by fragments HPL2 and LPL2
Invariant combination of aXY or γXY; symbol r corresponds to a or γ | Persistence length, a, nm | Helical repeat, γ, bp/turn |
rAA/TT | 50.4 (50.3) | 10.27 (10.26) |
rCC/GG | 41.7 (40.5) | 10.76 (10.73) |
2/(1/rAT + 1/rTA) | 42.7 (42.3) | 10.62 (10.61) |
2/(1/rGC + 1/rCG) | 49.6 (50.3) | 10.39 (10.36) |
2/(1/rAC/GT + 1/rCA/TG) | 50.7 (50.7) | 10.59 (10.59) |
2/(1/rAG/CT + 1/rGA/TC) | 52.6 (53.2) | 10.39 (10.40) |
3/(1/rAT + 1/rGA/TC + 1/rCA/TG) | 46.7 (45.8) | 10.51 (10.51) |
3/(1/rAC/GT + 1/rCG + 1/rGA/TC) | 55.3 (57.4) | 10.43 (10.42) |
The values of the invariants obtained from elemental set 2 without the extension are shown in parenthesis.