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. Author manuscript; available in PMC: 2011 Aug 24.
Published in final edited form as: Biochemistry. 2010 Aug 24;49(33):7069–7079. doi: 10.1021/bi1003298

Table 4.

Comparison of ligands bound in the monomers of the biological dimer of ovPGHS-1.

Monomer A
Monomer B
ovPGHS-1 Structure Ligand Relative Occupancy Conformation Of Dimer Interface Residues 123-129 Side Pocket Residues 510-515 Ligand Relative Occupancy Conformation of Dimer Interface Residues 123-129 Side Pocket Residues 510-515
1. Unoccupied Glycerol 1.0 upa Xb None 0 up Yc
2. Celecoxib (15)f Celecoxib 1.0 up X Celecoxib 0.5 up/downd X
3. Flurbiprofen (R120Q/Native)g Flurbiprofen 1.0 up X Water or Flubiprofen 1.0
0.25
up/down X
4. Nimesulideh Nimesulide 1.0 up X Nimesulide 1.0 up X
5. Diclofenac/ASA co-complexi Diclofenac 1.0 up Combination of X and Ze ASA Diclofenac 0.8
0.2
up X
a

“up” means a single conformation is present at dimer interface (i.e. the “up” conformation only).

b

X is the conformation most commonly observed in crystal structures (Figs. 2B and 6B).

c

Y is a conformation deviating most from the commonly observed Conformation X (Figs. 2B and 6B).

d

“up/down” means two conformations are present at the dimer interface (i.e. an “up” and a “down” conformation).

e

Z is an alternative conformation slightly different from X and Y.

f

Activity tested with one mole of celecoxib per mole of ovPGHS-1 dimer resulted in no loss of cyclooxygenase activity (15).

g

Activity tested with an excess of flurbiprofen resulted in complete inhibition of cyclooxygenase activity.

h

Activity tested with an excess of nimesulide resulted in no loss in cyclooxygenase activity (15).

i

Activity tested with acetylated ovPGHS-1 (maximum acetylation of one mole of [1-14C-acetyl] per mole of ovPGHS-1 dimer) resulted in complete inhibition of cyclooxygenase activity (15).