Table 1. General features of 14 plasmids of genus Listeria.
Host | Plasmid | Isolation | Status | Length [bp] | ORFsa | MGEsb | Mean Number of Amino Acids per CDS | Source/Accession |
L. monocytogenes 1/2b Lm1 | pLM33 | cheese | closed | 32307 | 36 | 9 | 258 | GU244485 |
L. monocytogenes 1/2a FSL F2-515 | pF2-515 | meat | contigs (11) | 37163 | 61 | 12 | 131 | Broad Institutec |
L. monocytogenes 7 UG1 SLCC2482 | pLM7UG1 | human | closed | 50100 | 55 | 13 | 260 | FR667690 |
L. monocytogenes 1/2c UG1 SLCC2372 | pLM1-2cUG1 | human | closed | 50100 | 54 | 13 | 264 | FR667691 |
L. monocytogenes 1/2b FSL J1.194 | pJ1-194 | human | contigs (1) | 57536 | 69 | 16 | 223 | Broad Institutec |
L. monocytogenes 1/2b UG1 SLCC2755 | pLM1-2bUG1 | human | closed | 57780 | 63 | 16 | 261 | FR667692 |
L. monocytogenes 1/2b FSL R2-503 | pR2-503 | human | contigs (3) | 56540 | 86 | 20 | 159 | Broad Institutec |
L. monocytogenes 4b FSL N1-017 | pN1-017 | trout | contigs (3) | 56037 | 62 | 13 | 245 | Broad Institutec |
L. monocytogenes 1/2a 08-5578 | pLM5578 | human | closed | 77054 | 76 | 11 | 291 | CP001603 |
L. monocytogenes 1/2a J0161 | pLMJ0161 | human | contigs (2) | 82700 | 90 | 10 | 266 | Broad Institutec |
L. monocytogenes 4b H7858 | pLM80 | meat | contigs (2) | 81588 | 88 | 11 | 264 | AADR01000010, AADR01000058 |
L. grayi subspecies grayi UG1 DSM20601 | pLGUG1 | chinchilla | closed | 79249 | 99 | 8 | 224 | FR667693 |
L. innocua 6a Clip11262 | pLI100 | cheese | closed | 81905 | 84 | 24 | 273 | AL592102 |
L. monocytogenes 4 DRDC8 | pCT100 | milk | closed | 37279 | 34 | 6 | 292 | U15554 |
Open Reading Frames.
Mobile Genetic Elements.
Plasmid length does not include spacers which were inserted between contigs. All genes automatically predicted by GenDB [58] to encode a recombinase, transposase, integrase, invertase or resolvase are denoted as mobile genetic element (MGE).