Table 3.
SNPs significantly associated with telomere length after FDR correction
Gene | SNP ID | Genomic position | Minor Allele |
MAF (%) | Beta† | SE | Ptrend | Padj‡ | |
---|---|---|---|---|---|---|---|---|---|
MEN1 | rs669976 | Chr11:64330165 | intronic (IVS8+115) | C | 10.05 | −0.042 | 0.018 | 0.017 | 0.022 |
MEN1 | rs524386 | Chr11:64341535 | downstream | C | 8.95 | −0.04 | 0.018 | 0.028 | 0.028 |
MEN1 | rs2957154 | Chr11:64341563 | downstream | G | 25.23 | −0.036 | 0.012 | 0.003 | 0.014 |
MEN1 | rs670358 | Chr11:64348255 | downstream | A | 10.47 | −0.046 | 0.017 | 0.007 | 0.014 |
RECQL5 | rs820152 | Chr17:71127683 | upstream | C | 37.74 | −0.029 | 0.010 | 0.006 | 0.025 |
MRE11A | rs12270338 | Chr11:93787112 | upstream (*5826) | A | 21.61 | 0.036 | 0.012 | 0.004 | 0.025 |
MRE11A | rs13447720 | Chr11:93804974 | intronic (IVS18−2174) | G | 22.73 | 0.037 | 0.012 | 0.003 | 0.025 |
TNKS | rs11991621 | Chr8:9443992 | upstream | T | 17.68 | −0.042 | 0.014 | 0.002 | 0.029 |
TNKS | rs12549064 | Chr8:9479437 | intronic (IVS2+4134) | C | 17.67 | −0.041 | 0.014 | 0.003 | 0.029 |
TNKS | rs10903314 | Chr8:9504516 | intronic (IVS2−5986) | T | 24.69 | −0.034 | 0.012 | 0.005 | 0.039 |
TNKS | rs6990300 | Chr8:9585271 | intronic (IVS5+9551) | G | 32.04 | −0.031 | 0.011 | 0.006 | 0.039 |
TNKS | rs11249943 | Chr8:9645273 | intronic (IVS18-1256) | C | 19.17 | −0.035 | 0.013 | 0.009 | 0.049 |
TNKS | rs17150478 | Chr8:9678444 | downstream | G | 18.77 | −0.042 | 0.013 | 0.002 | 0.029 |
All analysis were done using linear regression models with telomere length continuous, adjusted for gender, age, smoking status, principal components, and case/control status
MAF = minor allele frequency
SE = standard error
False Discovery Rate (FDR) corrected P-value